Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0363 ATGGCTCTTGTTTGGAATTTAGTCATCACTTTCGTAATTCTTGTTCTGCAACAACAATCTTGGGTCCTTGTCACCTTTGCCTCAAGCATTGTCCATATTGTGTATATGGGCGACAACAGAATAAAGCAGAGTGAGCAACACTTGGTTGAAGACTCCCACCTTGACATGCTATCTAGTATTCTCGGAAGCAAAGACGCTGCTAGGAAGTCCATCCTGTATAGCTATAGTCATGGCTTTTCTGGATTCGCTGCAGTTTTAAGTCAGCCCCAAGCTAGGCTCATTGCAGATTTCCCAGGGGTTGTCCGTGTAATTCCAAATAAAATTCTCAGTCTTCACACAACAAGAAGTTGGGACTTTTTGAACGTAAAGCAAGAAATAATAACCGGTGCTCTTTCTAGGGGTCAATCTGGAAGAGGAACCATCATCGGCATCATGGACACTGGTATTTGGCCAGAGTCTGAGAGCTTTAGAGATGAGCACATGGACAATCCTCCTCTTCACTGGCGTGGTATCTGCCAAGGAGGAGAAAATTTTGATCACTCTACTTGTAATAGGAAAATTATTGGTGCACGGTGGTACATTAAAGGATACGAAGCTGAAATTGGTAAACTAAATACAAGCGATGGGGTGGAGTACTTGTCTCCTCGAGATGCATCAGGCCATGGCACTCACACATCATCTACTGCAGCTGGTGTTGCAGTGGAAAATGCAAGCTTTATGGGACTAGCTAAAGGGTTGGCAAGAGGTGGTGCTCCATCAGCTTGGTTAGCTGTGTACAAAATTTGTTGGTCTACTGGGGGATGCAGCTCTGCTGATATTCTTGCAGCTTTTGATGATGCAATATTTGATGGGGTTGACATTCTTTCAGCATCTCTTGGATCAGATCCTCCACTTCCTACTTATGTTGAGGATGCACTGGCCATTGGTTCTTTTCATGCGGTTGCTAAAGGAATTTCTGTGGTATGTTCTGGTGGCAATTCTGGTCCATATTCCCAAACTGTCATAAACACTGCACCTTGGATTATTACCGTCGCAGCTAGTACCATAGACAGAGAATTTCCATCTAGGATTATCCTCGGAAACAATCAAACTGTACAGGGTCAGAGTTTATATACAGGGAAAGATTTGAGTAAGTTTTATCCAATTGTTTTGGGAGAAGACATAGCAGCATCGGATGCTGACGAAGAAAGCGCAAGGGGCTGCAATTCAGGGAGCCTGAATGCCACCTTAGCAAAAGGAAAAGCAATTCTGTGTTTTCAGTCTCGGTCACAGAGGTCAGCCACAGTTGCTATAAGAACAGTTACGGAAGCTGGTGGCTCTGGTCTCATATTTGCTCAGTTTCCCACTAAAGATGTTGATACATCATGGAGTAAACCCTGTGTCCAAGTTGATTTTATCACGGGAACAACTATTCTATCATACATAGAAGCAACTAGGAATCCTGTAGTAAAGTTTGGCAAAACAAAAACAGTTGTTGGCCAACAGATATCACCAGAAGTGGCATTCTTCTCTTCGCGAGGACCAAGTTCTTTGTCTCCTTCAGTATTGAAGCCTGACATTGCTGCTCCTGGGGTTGATATTCTTGCGGCCTGGTCACCTGCTTCTTCTGCTGGGCGTTTGTTATCTGATGCAAAATCAAAAAAGTTGCAGCCTCTTACCTTCAACTTGGAGTCAGGAACTTCCATGGCATGCCCTCACATTTCTGGTATTGTTGCACTTATAAAAACTGTCCATCCTACTTGGAGCCCCGCTGCAATTAAATCTGCCCTTGTCACAACAGCTTCTCTGAAAAACGAATACGATCAATACATCTGGGCCGAGGGAGCACCACATAAACAAGCTGATCCATTCGACTACGGTGGTGGACATGTTGATCCTAACAAAGTGACAGATCCTGGTCTGGTATACGACATGAAAACCTCAGACTACATTCATTTCCTTTGTTCTATGGACTACAATGACACTGCCATAAGCTCTTTAACAGGATTTCCTACCAAATGCCATAAATCACACAAATATCTCTTAAACATGAACCTCCCTTCTATCGTTATTCCTGAGCTGAAGCAACCCCTCACAGTTTCAAGAACAGTCACTAATGTTGGCCCAGTTCAATCTATCTACACCGCTCGTGTTGAACCTCCAATCGGCGTATCTGTCACAGTTGTGCCATCAACCTTAACATTTGGTCCTAAAAGAAAGAAAATGAAATTCAAGGTAACCTTTTCTTCCAAGCTACGAATTCAAAGCAGATTCTCATTTGGCTACCTTTTCTGGGAAGATGGGTCACATGAAGTCAGAATGCCATTAGCAGTTCGCTCTGTTGTACAAGAATTTTGA 2337 0.4343 MALVWNLVITFVILVLQQQSWVLVTFASSIVHIVYMGDNRIKQSEQHLVEDSHLDMLSSILGSKDAARKSILYSYSHGFSGFAAVLSQPQARLIADFPGVVRVIPNKILSLHTTRSWDFLNVKQEIITGALSRGQSGRGTIIGIMDTGIWPESESFRDEHMDNPPLHWRGICQGGENFDHSTCNRKIIGARWYIKGYEAEIGKLNTSDGVEYLSPRDASGHGTHTSSTAAGVAVENASFMGLAKGLARGGAPSAWLAVYKICWSTGGCSSADILAAFDDAIFDGVDILSASLGSDPPLPTYVEDALAIGSFHAVAKGISVVCSGGNSGPYSQTVINTAPWIITVAASTIDREFPSRIILGNNQTVQGQSLYTGKDLSKFYPIVLGEDIAASDADEESARGCNSGSLNATLAKGKAILCFQSRSQRSATVAIRTVTEAGGSGLIFAQFPTKDVDTSWSKPCVQVDFITGTTILSYIEATRNPVVKFGKTKTVVGQQISPEVAFFSSRGPSSLSPSVLKPDIAAPGVDILAAWSPASSAGRLLSDAKSKKLQPLTFNLESGTSMACPHISGIVALIKTVHPTWSPAAIKSALVTTASLKNEYDQYIWAEGAPHKQADPFDYGGGHVDPNKVTDPGLVYDMKTSDYIHFLCSMDYNDTAISSLTGFPTKCHKSHKYLLNMNLPSIVIPELKQPLTVSRTVTNVGPVQSIYTARVEPPIGVSVTVVPSTLTFGPKRKKMKFKVTFSSKLRIQSRFSFGYLFWEDGSHEVRMPLAVRSVVQEF* 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0363 778 PRINTS Subtilisin serine protease family (S8) signature 137 156 IPR015500 -
Vra2g0363 778 PRINTS Subtilisin serine protease family (S8) signature 217 230 IPR015500 -
Vra2g0363 778 PRINTS Subtilisin serine protease family (S8) signature 558 574 IPR015500 -
Vra2g0363 778 Gene3D Peptidase S8/S53 domain 139 643 IPR036852 GO:0004252|GO:0006508
Vra2g0363 778 Pfam Fibronectin type-III domain 676 771 IPR041469 -
Vra2g0363 778 Pfam Subtilase family 137 597 IPR000209 GO:0006508|GO:0008236
Vra2g0363 778 ProSitePatterns Serine proteases, subtilase family, serine active site. 559 569 IPR023828 -
Vra2g0363 778 CDD Peptidases_S8_3 111 595 IPR034197 -
Vra2g0363 778 Gene3D - 350 492 - -
Vra2g0363 778 CDD PA_subtilisin_like 357 484 - -
Vra2g0363 778 PANTHER OS09G0530800 PROTEIN 42 771 - -
Vra2g0363 778 ProSiteProfiles Serine proteases, subtilase domain profile. 116 630 - -
Vra2g0363 778 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 42 771 IPR045051 -
Vra2g0363 778 SUPERFAMILY Subtilisin-like 111 634 IPR036852 GO:0004252|GO:0006508
Vra2g0363 778 Gene3D - 647 775 - -
Vra2g0363 778 Pfam Peptidase inhibitor I9 31 112 IPR010259 -
Vra2g0363 778 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 25 112 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0363 Vra-Chr2 2782065 2787303 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0363 29 778 Subtilisin-like Serine Gene Family AT1G32960 48.226 0.0 683
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0363 - - gmx:100775442 1363.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0363 2 2782065 2787303 Vra2g0363 2 2782065 2787303 ECH