Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0360 ATGGGTTTTCGTTTACCTGGTATTAGAAAGGCATCTCTTCGAGCAATCCAAGCATCTTCAAAAGTTGTGGATGTGCCAAAGGGTTACATTGCAGTCTATGTTGGAGACCAAAGGAAGCGGTTTATGATCCCTGTGTCATACTTGAACCAACCTTCATTTCAAGATCTATTGAGTCAAGCCGAGGAAGAATTTGGCTATGACCATCCAACTGGTGGTCTCACAATTCCTTGTGGAGAAGATGTGTTCTCAGATATAACTTCTCGCTTCGATAGCTGCTAA 279 0.4265 MGFRLPGIRKASLRAIQASSKVVDVPKGYIAVYVGDQRKRFMIPVSYLNQPSFQDLLSQAEEEFGYDHPTGGLTIPCGEDVFSDITSRFDSC* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0360 92 Pfam Auxin responsive protein 19 87 IPR003676 GO:0009733
Vra2g0360 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 90 IPR003676 GO:0009733
Vra2g0360 92 PANTHER AUXIN-INDUCED PROTEIN 6B 1 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0360 Vra-Chr2 2761477 2762566 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0360 24 82 Calmodulin-binding Proteins AT3G43120 55.932 5.28e-19 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0360 K14488 - gmx:100795597 152.91