Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0358 ATGAAAACTGGTAACAGATTTGTGGGGATAGCTAATGCCAAGCAGAAACTTCAGAGAACTCTTTCACAGAGAATCAAAATGGCTTCTGCTGTTGCTGATGTTCCAAAAGGTCATTTGGCAGTGTACGTTGGAGAGAACCATAAGAGATTCGTGATTCCAATATCTTACCTGAGCCACCCTTTGTTCAGAGACTTGTTGGATTGGGCTGAAGAAGAATTCGGATTCAACCATCCAATGGGTGGTCTCACTATTCCATGCACTGAACATTACTTCATTACTCTAACTTCTTCTCTTAGTTAA 300 0.41 MKTGNRFVGIANAKQKLQRTLSQRIKMASAVADVPKGHLAVYVGENHKRFVIPISYLSHPLFRDLLDWAEEEFGFNHPMGGLTIPCTEHYFITLTSSLS* 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0358 99 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 10 98 IPR003676 GO:0009733
Vra2g0358 99 Pfam Auxin responsive protein 22 97 IPR003676 GO:0009733
Vra2g0358 99 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY 10 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0358 Vra-Chr2 2740617 2741791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0358 33 91 Calmodulin-binding Proteins AT5G20810 64.407 3.10e-20 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0358 K14488 - gmx:100781277 196.823