Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0339 ATGGGCAAGCCAGTTTTGAAATTGACTCTTCCCCAATTAGCTTTCGCCGTCCTTTTCTTGTTCATTTTCTTTTCCTGTGTTTGCTCCGATGAAGCTTCCAAAACCTTCATCTTCCGCGTGGACTCGCAGTCCAAGCCATCAGTGTTTCCTACACACTACCACTGGTATACCTCCGAGTTCGCCGAACAAACCCACATCCTCCACGTATACAACACCGTTTTTCACGGCTTCTCCGCCTTTCTCACGCCCCAACAGGTAGCCTCCATAAGCAACCACCCTTCCGTCCTCGCTGTCTTCCAAGATCGGCGCCGCCAGCTCCACACCACGCGCTCCCCGCAGTTCCTCGGCCTCCGCAACCAGCGAGGCCTCTGGTCCGAATCCGACTATGGCTCTGATGTCATCATCGGAGTCTTTGATACCGGCGTCTGGCCTGAGCACCGCAGCTTTTCTGATTTGAACCTCGGCCCAATTCCCCGTCGCTGGAAAGGCGCGTGCGAAACCGGCGCCAGGTTCTCTCCCAAAAACTGCAACCGTAAGCTCATCGGTGCCAGATTCTTCTCCAAGGGTCACGAAGCTGGCGCGGCTTCCGGTCCTCTCAATCCGATCAACGACACCGTTGAGTTTCGTTCCCCTCGCGACGCGGATGGCCATGGCACGCACACCGCTTCCACCGCTGCGGGCCGCTACGCCTTCCAAGCTAACATGTCCGGGTACGCTTCGGGAATCGCGAAGGGAGTGGCTCCGAAAGCGCGATTGGCGGTCTACAAAGTTTGCTGGAAAAACTCTGGTTGCTTCGATTCTGACATCCTCGCTGCATTCGACATCGCCGTTAGCGACGGCGTCGATGTCATTTCGATATCCATTGGCGGTGGTGACGGTATTGCCTCCCCTTATTACCTCGATCCTATCGCAATTGGGTCCTACGGTGCGGTTTCTAGAGGAGTGTTCGTGTCTTCTTCCGCCGGAAACGATGGGCCAAGCGGAATGTCAGTGACCAACCTCGCTCCGTGGTTAACAACAGTGGGAGCGGGCACCATTGATCGTGACTTCCCGGCACAGGTGGTTTTAGGCGACGGGAGGAAGCTCTCGGGCGTGTCGCTCTACGCCGGAGCGGCGTTGAGTGGGAAAATGTATCAACTGGTTTACCCTGGGAAATCAGGGATTCTTGGGGATTCCCTCTGCATGGAGAATTCCTTGGATCCGAACCTGGTGAAGGGTAAGATAGTAGTATGCGACAGAGGAAGTAGCCCGAGGGTTGCGAAAGGGTTGGTGGTGAAGAAAGCCGGCGGCGTGGGAATGATTCTGGCGAACGGAATCTCCAACGGCGAAGGACTGGTGGGAGATGCTCATCTTCTTCCTGCATGTGCTGTTGGCGCCAACGAAGGAGATGCAATCAAGAAATACATCTCAACTTCGACAAACCCAACGGCCACGCTTGATTTCAAAGGCACCATTCTTGGAATCAAACCGGCACCGGTCATTGCTTCTTTCTCGGCGAGAGGACCCAACGGTTTGAACCCTCAACTACTTAAACCCGATTTGATTGCTCCCGGTGTCAACATCATAGCGGCATGGACCGACGCTGTCGGCCCGACCGGTTTGGATTCGGATACGAGGAGAACGGAGTTCAACATCTTGTCTGGCACTTCCATGGCTTGCCCTCACGTGAGTGGCGCAGCAGCTTTGCTCAAATCCGCACACCCTGATTGGAGCCCCGCCGCCATTAGGTCCGCCATGATGACCACCGCCACCGTCCTGGATAACCGCAACCGGATCATGACCGACGAAGCCACTGGGAACAGTTCCACTCCTTATGATTTCGGCGCTGGTCATCTTAACCTTGGACGCGCCTTGGATCCTGGGTTGGTCTATGACATCACCAACAATGATTATGTTAACTTCCTTTGTGGTATTGGTTACGGACCCAAGGTTATTCAAGTGATTACTCGCACACCGGCGAGTTGTCCGGTGAGAAAGCCATCACCGGAGAATCTGAATTACCCTTCCTTCGTTGCCATGTTTCCGGTTGGGTCCACGGGAGTGGCGTCCAAGACGTTCATTCGGACCGTGACCAACGTGGGGTCTGCGAACGCCGTTTATCGCGTGAGCGTGGAGGCGCCGGCGAGTGGAGTGACCGTGACGGTGAAGCCATCGCGGCTGGTGTTCTCGGAGGCGGTGAAGAAGCGGAGCTATGTGGTGATAGTGGCGGGGAATACCCGGAATCTAAAGATGGGTCAATCTGGGGCTGTTTTCGGGTCGCTGACGTGGACGGATGGGAAGCACGTGGTTCGGAGCCCCATTGTCGTTACTCAAATAGATCCGTTATAA 2328 0.5541 MGKPVLKLTLPQLAFAVLFLFIFFSCVCSDEASKTFIFRVDSQSKPSVFPTHYHWYTSEFAEQTHILHVYNTVFHGFSAFLTPQQVASISNHPSVLAVFQDRRRQLHTTRSPQFLGLRNQRGLWSESDYGSDVIIGVFDTGVWPEHRSFSDLNLGPIPRRWKGACETGARFSPKNCNRKLIGARFFSKGHEAGAASGPLNPINDTVEFRSPRDADGHGTHTASTAAGRYAFQANMSGYASGIAKGVAPKARLAVYKVCWKNSGCFDSDILAAFDIAVSDGVDVISISIGGGDGIASPYYLDPIAIGSYGAVSRGVFVSSSAGNDGPSGMSVTNLAPWLTTVGAGTIDRDFPAQVVLGDGRKLSGVSLYAGAALSGKMYQLVYPGKSGILGDSLCMENSLDPNLVKGKIVVCDRGSSPRVAKGLVVKKAGGVGMILANGISNGEGLVGDAHLLPACAVGANEGDAIKKYISTSTNPTATLDFKGTILGIKPAPVIASFSARGPNGLNPQLLKPDLIAPGVNIIAAWTDAVGPTGLDSDTRRTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTATVLDNRNRIMTDEATGNSSTPYDFGAGHLNLGRALDPGLVYDITNNDYVNFLCGIGYGPKVIQVITRTPASCPVRKPSPENLNYPSFVAMFPVGSTGVASKTFIRTVTNVGSANAVYRVSVEAPASGVTVTVKPSRLVFSEAVKKRSYVVIVAGNTRNLKMGQSGAVFGSLTWTDGKHVVRSPIVVTQIDPL* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0339 775 Pfam Fibronectin type-III domain 664 769 IPR041469 -
Vra2g0339 775 CDD Peptidases_S8_3 105 584 IPR034197 -
Vra2g0339 775 Gene3D Peptidase S8/S53 domain 132 631 IPR036852 GO:0004252|GO:0006508
Vra2g0339 775 Pfam Subtilase family 130 596 IPR000209 GO:0006508|GO:0008236
Vra2g0339 775 Pfam PA domain 379 465 IPR003137 -
Vra2g0339 775 PRINTS Subtilisin serine protease family (S8) signature 130 149 IPR015500 -
Vra2g0339 775 PRINTS Subtilisin serine protease family (S8) signature 213 226 IPR015500 -
Vra2g0339 775 PRINTS Subtilisin serine protease family (S8) signature 547 563 IPR015500 -
Vra2g0339 775 MobiDBLite consensus disorder prediction 196 221 - -
Vra2g0339 775 PANTHER XYLEM SERINE PROTEINASE 1 25 769 - -
Vra2g0339 775 Pfam Peptidase inhibitor I9 47 107 IPR010259 -
Vra2g0339 775 SUPERFAMILY Subtilisin-like 106 622 IPR036852 GO:0004252|GO:0006508
Vra2g0339 775 ProSitePatterns Serine proteases, subtilase family, serine active site. 548 558 IPR023828 -
Vra2g0339 775 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Vra2g0339 775 CDD PA_subtilisin_like 354 479 - -
Vra2g0339 775 Gene3D - 635 772 - -
Vra2g0339 775 SUPERFAMILY Protease propeptides/inhibitors 36 103 - -
Vra2g0339 775 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 25 107 IPR037045 -
Vra2g0339 775 Gene3D - 347 486 - -
Vra2g0339 775 ProSiteProfiles Serine proteases, subtilase domain profile. 105 618 - -
Vra2g0339 775 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 25 769 IPR045051 -
Vra2g0339 775 SUPERFAMILY PA domain 387 467 IPR046450 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0339 Vra-Chr2 2602184 2604863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0339 17 775 Subtilisin-like Serine Gene Family AT4G34980 75.491 0.0 1210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0339 - - gmx:100817537 1404.81