Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0326 ATGGCGGCTACTGTGTCTGCGTGGTCAAAGCCCGGCGCGTGGGCCATCGATTCCGAGGAACACGAGGCTGAACTCCTCCAACAGAACCCCACCCAGGACACCGTCAAACCTCTCGCCGACTTCCCCTCCCTCGCTGTTGCCGCCGCTACCAAGCCCAAGAAGAAGAAGGCCCAGACCTACTCCCTCGCTGAGTTCACTGCCAAGCCCGACACTGCCTTCGCCGACCAAGATCCCGTCGTCCTCCCCACAGGCCCGCGCCAGCGCACCGCTGAGGAGCTCGACCGCACCCGTCTAGGTGGTGGCTTCCGCTCCTACGGTGACCGCCCTAACAGGAATTCGTCGGGGGAAGACTCGTCTTCCCGTTGGGGTTCATCTAGGGTTTCTGACGAGCCCAGGAGAAATGGTTCCTTTGGGACTAGGGATTCCAATCGCGAGCTTCCCCCTTCTCGCGCTGACGAGACTGATAATTGGGCGGCGGCAAAGAAACCTTCGGGAGGGTTTGAGAGGAGGGAGAGGGATAGAGGAGGGTTCTTCGATTCGCAGTCGCGCGCTGACGAATCGGAGAGCTGGGTTTCGAATAAGAGCTTTGTGCCGTCGGAGCGGCGATCCAACGGTGGAGGGTTTGAGAGAGAGAGGAAGGTAATTGGGTTTGGCTCCAGCGGCGGCGCTGATTCAAATGACTGGAACAAGAAGAAGGGCGAATCCAACGTTGGTAGCGAGAGTGTTGGTGCTGGTGGAGGGAGACCAAGGCTTGTTCTGCAGCCTCGGTCTCTGTCGGTGTCCAATGAAGGGCGGGATGGGAATGTGGGGAAACCTAAAGGGGTTAATCCGTTCGGAGAAGCGAGGCCAAGGGAGCAGGTTTTGGCGGAGAAAGGGCAAGATTGGAAAAAGATTGATGAACAGCTTGAGAGCATGAAGATTAAGGAGACAGGTGGAGGTGATGCCTTTGTGAAGAGGGGTTTTGGGTCTTCCAATGGAGGAGGACGAGCTGCTTTGCCTGAAAGTCGCACTGAGAGGAGTTGGAGGAAGCCCATATCTGATGACGAAAGTCCTAAAAGTGCTGAAAAAGTTGAAGATAAAGCTGTAGAAGAAAATTGA 1098 0.5647 MAATVSAWSKPGAWAIDSEEHEAELLQQNPTQDTVKPLADFPSLAVAAATKPKKKKAQTYSLAEFTAKPDTAFADQDPVVLPTGPRQRTAEELDRTRLGGGFRSYGDRPNRNSSGEDSSSRWGSSRVSDEPRRNGSFGTRDSNRELPPSRADETDNWAAAKKPSGGFERRERDRGGFFDSQSRADESESWVSNKSFVPSERRSNGGGFERERKVIGFGSSGGADSNDWNKKKGESNVGSESVGAGGGRPRLVLQPRSLSVSNEGRDGNVGKPKGVNPFGEARPREQVLAEKGQDWKKIDEQLESMKIKETGGGDAFVKRGFGSSNGGGRAALPESRTERSWRKPISDDESPKSAEKVEDKAVEEN* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0326 365 MobiDBLite consensus disorder prediction 182 200 - -
Vra2g0326 365 MobiDBLite consensus disorder prediction 164 181 - -
Vra2g0326 365 MobiDBLite consensus disorder prediction 107 132 - -
Vra2g0326 365 Pfam Plant specific eukaryotic initiation factor 4B 7 307 IPR010433 GO:0003743
Vra2g0326 365 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B3 1 356 - -
Vra2g0326 365 MobiDBLite consensus disorder prediction 307 365 - -
Vra2g0326 365 MobiDBLite consensus disorder prediction 133 157 - -
Vra2g0326 365 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 356 IPR010433 GO:0003743
Vra2g0326 365 MobiDBLite consensus disorder prediction 335 365 - -
Vra2g0326 365 MobiDBLite consensus disorder prediction 66 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0326 Vra-Chr2 2494439 2496710 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0326 1 346 Eukaryotic Initiation Factors Gene Family AT4G38710 49.373 8.50e-62 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0326 - - pvu:PHAVU_011G033300g 629.787