Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0313 ATGCGATTTTTCTTGTTGCTGCTTGGGTACGGGAGTAGTGTACCAATGAGTTCTCGGACAGGCAAGGGACCTGCTGTCAGAAGCTACCGGAGGAGAAAGGCAGTTTTGGACCTTGACCTTAATCTTGTGCCGGCTAGTGACAATCGTGAGCACGAGGGACCTTCAACACAGTCAGGGCCACTAGGAGTTACAGTTGAACAGCAGCCACCGGTTTCTCAACCAACGATGATTGATGTGGAAGACATTGATGATGATGTTGTTGAATGTACCCCAGGGGCTTTTGCCGAGGCTAAAAACAAATCAAGAAGAAACCGTGGGAGGACTATAGTTGATGTTGAACTAGAAGATCAGACTCGACGCAACAAGCGCAGAAGAGAACTGCGAAATCAAACAATTATTAATTGTGAGAAGTATATAAATTTAGAAGGCAGTAGCAGTTCTATGGGTGATACTGCTAAAGTGCTTCCTGAACCTCGAATTGAGCCTGTTTTCAACTGTCCAATATGTATGGGTCCTTTGGCAGAAGAAATGTCGACAAGGTGTGGTCATATTTTTTGCAAGAATTGCATCAAGGCTGCTATAAGCGCTCAGGGAAAATGCCCTACCTGTAGAAAAAAGATTACTGTGAAAGAGCTTATAAGGGTGTTTCTCCCATCAACTAGTTGA 666 0.4444 MRFFLLLLGYGSSVPMSSRTGKGPAVRSYRRRKAVLDLDLNLVPASDNREHEGPSTQSGPLGVTVEQQPPVSQPTMIDVEDIDDDVVECTPGAFAEAKNKSRRNRGRTIVDVELEDQTRRNKRRRELRNQTIINCEKYINLEGSSSSMGDTAKVLPEPRIEPVFNCPICMGPLAEEMSTRCGHIFCKNCIKAAISAQGKCPTCRKKITVKELIRVFLPSTS* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0313 221 Pfam Zinc finger, C3HC4 type (RING finger) 165 203 - -
Vra2g0313 221 MobiDBLite consensus disorder prediction 43 63 - -
Vra2g0313 221 PANTHER RING ZINC FINGER-RELATED 16 221 - -
Vra2g0313 221 ProSiteProfiles Zinc finger RING-type profile. 166 204 IPR001841 -
Vra2g0313 221 SMART ring_2 166 203 IPR001841 -
Vra2g0313 221 SUPERFAMILY RING/U-box 165 210 - -
Vra2g0313 221 ProSitePatterns Zinc finger RING-type signature. 181 190 IPR017907 -
Vra2g0313 221 PANTHER ELFLESS, ISOFORM B 16 221 - -
Vra2g0313 221 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 152 218 IPR013083 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0313 27 220 C3H Transcription Factor Family AT5G48655 53.731 3.43e-54 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0313 K22651 - gmx:100792853 305.449