Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0293 ATGGCGTGCAGAACTTCAAGCATAGCAAGTTTTGTTGTCACTACGTTNGTGTTGTTAGCCACANTATNTGATGCACAATTGTCTTCTAAGTTTTATGAGAGTACATGTCCCAATGCACTTTCCACCATNAGAACTGTCATTCGTACTGCAGTTTCTAAGGAACGTCGCATGGCTGCATCTCTCATTCGCCTTCATTTTCACGATTGTTTTGTTCAGGGTTGTGATGCATCAATTTTGCTTGATGATAGCTCCACCATCGAGAGTGAAAAGACTGCACCTCAGAACTTTAACTCAGTAAGAGGATTTAACGTTATCGATCAAGCAAAAACTGAGGTGGAGAAAGTGTGTCCAGGAGTTGTATCATGTGCAGACATTGTGGCAGTAGCTGCTCGTGATGCATCATTTGCTGTGGGTGGTCCATCATGGACTGTGAAACTTGGAAGAAGAGATTCTACCACAGCAAGCAAAATTGAAGCCACTAATGACCTTCCACGTTTTACAGACGATGTTGACATTCTTATTTCTAGATTCAACAAGAAGGGACTCACTGCCAGAGACATGGTTACTCTATCTGGTGCTCACACAATTGGACAAGCTCAATGTTCGACATTCCGTGGAAGGATTTACAACAATGCAAGTGATATTGATGCTGGATTTGCAAGCACTCGTCAACGGGGTTGTCCATTAGTTGTCAATGATGATAATGACAAGAAATTGGCAGCACTAGACTTGGTGACACCTAATTCATTTGACAACAACTACTTCAAGAATTTGATTCAGAAGAAGGGTCTTCTTCACTCAGATCAAGTTCTATTCAGTGGAGGCTCTACAGATTCTATTGTGTCCGAATACAGCAAAAATCCTACAACTTTTAAGTCTGACTTTGCAGCTGCTATGATCAAAATGGGAGATATTGAACCATTAACCGGATCAGCTGGAATCATCAGAAACATTTGCAGCTCTGTCAACTAA 972 0.4126 MACRTSSIASFVVTTXVLLATXXDAQLSSKFYESTCPNALSTXRTVIRTAVSKERRMAASLIRLHFHDCFVQGCDASILLDDSSTIESEKTAPQNFNSVRGFNVIDQAKTEVEKVCPGVVSCADIVAVAARDASFAVGGPSWTVKLGRRDSTTASKIEATNDLPRFTDDVDILISRFNKKGLTARDMVTLSGAHTIGQAQCSTFRGRIYNNASDIDAGFASTRQRGCPLVVNDDNDKKLAALDLVTPNSFDNNYFKNLIQKKGLLHSDQVLFSGGSTDSIVSEYSKNPTTFKSDFAAAMIKMGDIEPLTGSAGIIRNICSSVN* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0293 323 Gene3D Peroxidase, domain 2 164 302 - -
Vra2g0293 323 SUPERFAMILY Heme-dependent peroxidases 26 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vra2g0293 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Vra2g0293 323 PANTHER PEROXIDASE 72-RELATED 8 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra2g0293 323 CDD secretory_peroxidase 26 322 IPR033905 GO:0004601|GO:0042744
Vra2g0293 323 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Vra2g0293 323 Pfam Peroxidase 44 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra2g0293 323 PANTHER PEROXIDASE 8 322 - -
Vra2g0293 323 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra2g0293 323 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra2g0293 323 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra2g0293 323 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra2g0293 323 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra2g0293 323 Gene3D - 30 320 - -
Vra2g0293 323 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra2g0293 323 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra2g0293 323 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra2g0293 323 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra2g0293 323 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra2g0293 323 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra2g0293 323 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra2g0293 323 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra2g0293 323 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra2g0293 323 ProSiteProfiles Plant heme peroxidase family profile. 26 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0293 Vra-Chr2 2210822 2225844 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0293 11 323 Peroxidase AT1G14550 67.619 3.70e-152 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0293 K00430 - gmx:100786161 548.125