Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0292 ATGATGGGAAATGATAGTGCAATGTGTGAAACCAAGTGCAGGTATGATGTTTTCCTTAGTTTTAGGGGAGAAGACACTCGTCACACATTCACTTGTCATCTCTATCATGCTTTGCGTCGGAAGGGAATTATCACCTTCATGGATGATGGAGAACTCAAGCTTGGAGATCAGATTGGTCCAACACTTCTTAGGGCCATTGAAGAATCGAGCATCTCAATTGTTGTTTTATCAGAAAATTATGCAGATTCTTCATGGTGCCTTGATGAACTTGTGAAGATCCTCGAGTGTAAGGAGTCAAACAACCAGCTGGTTTGGCCAATCTTCTACAAAGTGAATCCGTCAGATGTGAGACATCAGAAGGGAAGTTATGGTGAGGCCATGACTAACCATGAAAAAAGGTTTGGAAAAGACTCAAAGAAGGTGCTCCAATGGAGGTCAACCTTGACTGCCATAGCCGATATGACAGGAGAGCATCTGAAATCTGAACAAGGGAGAGATGAATCCAAGTTTATAGAAGAACTTGTTAGCATGATTTTCATGAAAGTGTCTCCTAAATATTTGTCAAGTGATGAGCATATAGTAGGACGAGAGTATCGAGTTGAAGAACTGAAATCACTTCTAAACCTTGAGTCTCCTAATATCAAATTGTTAGGGATTCATGGAACAGGTGGAATTGGCAAAACCACACTTGCCAAAGCTTTGTATGACTCCATTTATAAACAGTTTCAGGGTTCATGTTTTCTTTTCAACGTTCGAGAAAATTCAAATCAAATTAATGGTATAGAATTTCTGCAACAAAGGCTTCTATCAGAGATCCTTGAGGACAGTAAAATTCAGCTGGCAAGTAAAGCAGAAGGAACCAGCAGAATAAAACAGAGTCTACGTTCAAAAAGAATTCTCATAGTTCTTGATGATGTTGATGACATTGAACAGTTTCAAAATTTGGCAGGGAAAAGATTTTGGTATGGTAAGGGGAGCAGAATCATTGTAACAACAAGAGATAAAAAATTACTTGATGTTGGTGGGGTCGAGAACAGATATGAAGTGAAAGGGCTAAACAACCAAGAGTCTCTGGAACTCTTCTGTCAAAGTGCCTTTGGAAACAGTTGTCCTGAAACAAACTATGAAGATCTGTCAAATCGAGCAATAGGCTGTTGCAAAGGCCTTCCACTGGCCTTAAAAGTTCTGGGCTCTCATATGATTGGAAAAGATTTTGGTGGATGGAAGACTGCATTAGATAGATATGAGAAGGGTCCACATCAAGATGTTCAAAAAGTTCTCAGAATAAGCTATGACAGCTTGCCCTTCAATGAGAAAAACATTTTTCTCGACATTGCATGCTTCTTCAAAGGGCAAAGATCAGAATATGTAAAGAGAGTATTGGATGCATGTGACTTTAACTCAGGAGATGGAATTGATACATTAGTTAATAAATCTTTATTAACTGTTGACAGCCAAAGCGAATGTTTGGAGATGCATGACCTGATACAAGACATGGGTAAAGAGATTGTCAAAGAGGAAGCATGGACTGAAATTGGTGAACGCAGCAGATTGTGGTTTCACGAAGATGTTCTTCGAGTACTTGCTGATGATATGGGAAGTGGGAAGATTCAAGGACTAATGCTCGATCCCCCTCAAAGAGGAAGAATTAATTGTACTGGTACTGTATTTGAGAAGATGAAGAATCTTAGAATTCTCATTGTTCGTAATACGAGCTTTTCACATGAGCCTAGTTGTCTCCCAAATAACCTAAGGCTACTTGATTGGAAGAATTACCCTTCAAAATCCTTCCCTTCAGAATTTTATCCCAGGAATATTGGGGCATTTAATTTAAGTAGAAGTGTGCTCGCACTGAAAGAACCATTTGAGAGATTTCAGCATTTGACTTATATGAATATATCTTATTGTAATATGGTTACTAAATTTCCTGATGTGTCTGGGGCCAAAAATTTAAGAGAATTGAGACTCGATGGATGCGAGAAACTGGTTACTATTCATGAATCAGTTGGACTTCTCGCTAACCTTGTTTTTCTAAGTGCTTCAGAATGCATCCTACTCAAAAAGTTTTTTTCAACAATGTATTTGCCTTCTCTCGAATACCTTTCCTTAAACCTCTGCACAAAACTAGCGTTCTTCCCAGAGATCAGTGGAACGATGAACAGCAAATTGAAGATTAATATGTTGGATACAGCTATTACCGAGCTTCCAGAATCCATTGAAAAACTTACTGGACTTACCTATCTTGACATGACAGATTGCAAGGAACTTCAACATGTACCAGGTAGTTTATTTATGTTGCCAAATTTTGTCACATTAAAAATTGGAGGGTGTCGTCGGCTTCGAGAGTCAATTACAAGGTTCAAAGGAAGTGATTCAGTTCGCCCAAAACTTGAGACATTACATTTCGATAATGCTTATCTATCTGAGAAAGATGTTCGTACGATTATTTACCATTTTCCTAACTTGAAAGACTTAAATATATCGGGCAACCCAGTTGTGTATCTCCCAGCATGCATTAAAGAATCTACTAACTTGACAAGTCTTCACCTGAGGTATTGTGATGTGCTTCAAGAAATTCCAGCACTGCCGTCAAGTGTTCAGAAAGTAGATGCAAAATACTGCCATTCCTTAAGTTCGAAGTCATTAAACATCTTGTGGAATCAGGTCCGTAAAGAAACGAAAAGATTAGAAGTGGTGATGCCAAAAAGGGAGATTCCAGAATGGTTTGACCATGTTAATAAGGGAGGGTTTCCAGAATTCACTGCTCGTAGAAAGTTCCCAGCTCTTGCTCTAGCTTTAGTGTTCGGTGAAGTGGATGCCATAGCCGACAGAGAAATAATGGAAGGTCGCTGGAGAACTGTTGGAATGCATTTATTCATTCAAGGTAAACGCAGACGGTACCATAATTTCAGCGTGGCCGAGAATCATGTGTTGCTGTGTGACCTGCGAGTTTTGTTCAGTTTGGAGAAATGGGAGGATGTAGGATTTGGAGTTGATGAGGATTGGAAGACCTTACGAGTTTCCTGTGAAACAAATTTGAGTCTATGTTCATGGGGAGTGTATGTCTACAAAACTGAGACTAACATGGATGATATCAACTTCAATAGTCAACATCCAAGTTCCTCTTTGGTGTGGAGTGATGACGAGCTGATCAGTGATATGGATAAAATAGTAAGCAAGACAAGAAGTTTGAATCTACCAGAAATGCATAGGGAGTATCGTATGTGGAGCACTGGATCTCGAAAACGCGCCTATTTTAAAGGTGAAAGTAGCCAAGGTTTGGAAAAAGCATCGAGAAGGGTCATGGCCTTAAGAAGGGTGGAAGGAAAATCGGGAATGAACATTGAGGATGAGAAGGACAAAGATTTGGATGCAATGTTGGTTGTGCTGGGAACTGCAGAACTTGATAAACATTTTCATTATCCTAACAGTCACACTGCCGAATCCTTTACTTCAAAATATTGCTGTATACTTTGA 3477 0.3934 MMGNDSAMCETKCRYDVFLSFRGEDTRHTFTCHLYHALRRKGIITFMDDGELKLGDQIGPTLLRAIEESSISIVVLSENYADSSWCLDELVKILECKESNNQLVWPIFYKVNPSDVRHQKGSYGEAMTNHEKRFGKDSKKVLQWRSTLTAIADMTGEHLKSEQGRDESKFIEELVSMIFMKVSPKYLSSDEHIVGREYRVEELKSLLNLESPNIKLLGIHGTGGIGKTTLAKALYDSIYKQFQGSCFLFNVRENSNQINGIEFLQQRLLSEILEDSKIQLASKAEGTSRIKQSLRSKRILIVLDDVDDIEQFQNLAGKRFWYGKGSRIIVTTRDKKLLDVGGVENRYEVKGLNNQESLELFCQSAFGNSCPETNYEDLSNRAIGCCKGLPLALKVLGSHMIGKDFGGWKTALDRYEKGPHQDVQKVLRISYDSLPFNEKNIFLDIACFFKGQRSEYVKRVLDACDFNSGDGIDTLVNKSLLTVDSQSECLEMHDLIQDMGKEIVKEEAWTEIGERSRLWFHEDVLRVLADDMGSGKIQGLMLDPPQRGRINCTGTVFEKMKNLRILIVRNTSFSHEPSCLPNNLRLLDWKNYPSKSFPSEFYPRNIGAFNLSRSVLALKEPFERFQHLTYMNISYCNMVTKFPDVSGAKNLRELRLDGCEKLVTIHESVGLLANLVFLSASECILLKKFFSTMYLPSLEYLSLNLCTKLAFFPEISGTMNSKLKINMLDTAITELPESIEKLTGLTYLDMTDCKELQHVPGSLFMLPNFVTLKIGGCRRLRESITRFKGSDSVRPKLETLHFDNAYLSEKDVRTIIYHFPNLKDLNISGNPVVYLPACIKESTNLTSLHLRYCDVLQEIPALPSSVQKVDAKYCHSLSSKSLNILWNQVRKETKRLEVVMPKREIPEWFDHVNKGGFPEFTARRKFPALALALVFGEVDAIADREIMEGRWRTVGMHLFIQGKRRRYHNFSVAENHVLLCDLRVLFSLEKWEDVGFGVDEDWKTLRVSCETNLSLCSWGVYVYKTETNMDDINFNSQHPSSSLVWSDDELISDMDKIVSKTRSLNLPEMHREYRMWSTGSRKRAYFKGESSQGLEKASRRVMALRRVEGKSGMNIEDEKDKDLDAMLVVLGTAELDKHFHYPNSHTAESFTSKYCCIL* 1159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0292 1158 Gene3D - 185 344 IPR027417 -
Vra2g0292 1158 SUPERFAMILY "Winged helix" DNA-binding domain 422 528 IPR036390 -
Vra2g0292 1158 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 20 1028 - -
Vra2g0292 1158 Gene3D - 12 184 IPR035897 -
Vra2g0292 1158 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 1028 IPR044974 GO:0006952
Vra2g0292 1158 SUPERFAMILY L domain-like 557 883 - -
Vra2g0292 1158 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 156 IPR035897 -
Vra2g0292 1158 Pfam TIR domain 15 188 IPR000157 GO:0007165
Vra2g0292 1158 Gene3D - 351 430 IPR042197 -
Vra2g0292 1158 SMART till_3 14 154 IPR000157 GO:0007165
Vra2g0292 1158 Gene3D - 431 502 IPR036388 -
Vra2g0292 1158 CDD AAA 194 334 - -
Vra2g0292 1158 ProSiteProfiles TIR domain profile. 13 182 IPR000157 GO:0007165
Vra2g0292 1158 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 445 IPR027417 -
Vra2g0292 1158 Gene3D Ribonuclease Inhibitor 726 897 IPR032675 -
Vra2g0292 1158 Gene3D Ribonuclease Inhibitor 549 725 IPR032675 -
Vra2g0292 1158 PRINTS Disease resistance protein signature 216 231 - -
Vra2g0292 1158 PRINTS Disease resistance protein signature 293 307 - -
Vra2g0292 1158 PRINTS Disease resistance protein signature 386 400 - -
Vra2g0292 1158 PRINTS Disease resistance protein signature 740 756 - -
Vra2g0292 1158 Pfam NB-ARC domain 196 433 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0292 Vra-Chr2 2206118 2210579 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0292 15 815 WRKY Transcription Factor Family AT4G12020 32.567 5.42e-97 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0292 - - gmx:100801890 1412.13