Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0282 ATGGTTTTCACAGACAATGACAGTGCAAATGCAAGTGAAATATACAAAGCTCAAATGCACGTGAACAAATATCTCCTCGGCTTCCAAAGCTGCATGGCGGTGAAGTTTGCGACGGAGGTAGGCATAGCCGACGCAATCCACCGTCACGGAAAACCTATCACTCTCTCCGACTTGGCCTCATCTCTGAATCTGCCGCCTTCAAAAGTCGGTGTTCTCCATCGCTTCATGCGCCTTCTAACACACAATGGCTTCTTCACGAAAACACCTTCACAGAACTCTGAAGAAGAAGAAGAAACATATTCTTTGACTCTTGCATCAAAGTTTCTGGTCAGAAGCAATTCCTTCTGCTTAGCAGATAATGCGGAAGTAGCGTTTCATCCAAGTATGTTTAACATGTGGAACTCCTCCAAGAAACTGTTTACAGAGGATACTCAAGTTCCGTTGTTCGAGAGCGTAACCGGAGAGAGTTACTTTGACTTCATCAAAAATGATTTTCAGTTTCTGGATGTATTTCAGAAGGCTGTGGCAGCTGATTCTGAAATGATCAAACTGGGTCTCCAAGAATGCAAGCACGTGTTTGAGGGGTTGTCTTCTCTTGTCGATGTGGGAGGTGGCACTGGTGCTGTCTCCAGGCTCATACTCGAATCCTTTCCTCACATGAAATGCACAGTCCTTGACCTACCACAAGTTGTGGCCAATTTGAAAACAGCCCAAAATCTGAGTTTTGTTGGTGGTGACATGTTTGAATCAATTCCTTCTGCTGATGCAGTTTTACTCAAGTGGGTTCTGCATAATTGGGATGATGAACTTTCTATAAAGATATTGAAGAACTGCAAAGAAGCAATTTCTGGGAAAGGGAAGGAGGGAAAGGTGATAATCATAGACGTGGTAATTGATGAAGCAGGTGATGATCGAGATTTGACTGAGCTGAAGCTGAACTATGACTTGGCGATGTTGACTCTCTTGAATGGAAAAGAAAGAGAGAAGAAAGAATGGGAGAAACTTATATACCAGGCTGGCTTCACCAGCTGCAAGTTTAGTCCACTTTTTGGCTTCAAATCTCTCATCCAAGTTTATCCATGA 1083 0.434 MVFTDNDSANASEIYKAQMHVNKYLLGFQSCMAVKFATEVGIADAIHRHGKPITLSDLASSLNLPPSKVGVLHRFMRLLTHNGFFTKTPSQNSEEEEETYSLTLASKFLVRSNSFCLADNAEVAFHPSMFNMWNSSKKLFTEDTQVPLFESVTGESYFDFIKNDFQFLDVFQKAVAADSEMIKLGLQECKHVFEGLSSLVDVGGGTGAVSRLILESFPHMKCTVLDLPQVVANLKTAQNLSFVGGDMFESIPSADAVLLKWVLHNWDDELSIKILKNCKEAISGKGKEGKVIIIDVVIDEAGDDRDLTELKLNYDLAMLTLLNGKEREKKEWEKLIYQAGFTSCKFSPLFGFKSLIQVYP* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0282 360 SUPERFAMILY "Winged helix" DNA-binding domain 12 113 IPR036390 -
Vra2g0282 360 PIRSF O-mtase 2 360 IPR016461 GO:0008168
Vra2g0282 360 Pfam O-methyltransferase domain 141 341 IPR001077 GO:0008171
Vra2g0282 360 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 360 IPR016461 GO:0008168
Vra2g0282 360 Gene3D - 3 109 IPR036388 -
Vra2g0282 360 PANTHER ISOFLAVONE 4'-O-METHYLTRANSFERASE 8 360 - -
Vra2g0282 360 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 116 357 IPR029063 -
Vra2g0282 360 PANTHER O-METHYLTRANSFERASE 8 360 IPR016461 GO:0008168
Vra2g0282 360 CDD AdoMet_MTases 199 298 - -
Vra2g0282 360 Pfam Dimerisation domain 32 80 IPR012967 GO:0046983
Vra2g0282 360 Gene3D Vaccinia Virus protein VP39 111 360 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0282 Vra-Chr2 2147660 2149015 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0282 32 345 Monolignol Biosynthesis Gene Families AT5G54160 32.508 1.79e-47 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0282 K22588 K13259 gmx:100807589 473.011