Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0274 ATGGCGTCCTCGTCTCTCATTTCCAATATTCTTTTTCTTCTTCTTCTCTCTTTCACCAAAGAAGCTTTATCTGTGTCAAAACTTTCATTGACTGGTGATCATAATTACATTAGCCGGGAAATACTGGCAGAACAAGAAGCTGACAGAGTTTATGAATTACCAGGACAACCACCAGTGAAATTCAAGCAATATGCAGGTTATATCACTGTCAATGAAACTCATGGAAGAGCACTGTTTTATTGGTTCTTTGAGGCCACCCATCAACCACACAAAAAACCTGTTCTGCTATGGTTCAATGGAGGCCCAGGTTGTTCTTCAATTGGTTTTGGAGAAGCAGAGGAGTTAGGACCCTTCTTTCCTCAGGACAGTTTCCAGCCAAAGCTAAAGTTGAACCCTTATTCATGGAACAATGCTGCCAATCTTTTGTTTTTGGAAAGCCCTGTTGGAGTGGGATTCTCCTACACCAACACCAGCAGAGATTTGTACGAACTCGGTGACGCCATTACTGCTAAGGATTCACACACCTTCATAGTCAATTGGTTTAGAAGATTTCCACAATTCAGATCGCACGAGTTCTACATTGCTGGCGAAAGCTATGGAGGGCACTACGTTCCACAATTGTCCGAGCTCATTTTCGATCACAATAGCAATCGTGCCAAGAAAGACTACATCAGGTTCAAAGGATTCATGATTGGAAATGCAGCAATTGACAACGAAGCAGATCAGAAGGGTTTGGTAGAGTATGCCTGGTATCATGCAGTGATATCCGATGGCTTATATCAGAACATTACATCAAATTGCAATTTCAAATTTGAAAACCAAACAAATGAATGCGATCACTATATGGATAAGTTCTTCAGTGCGTATGGCGTTATTGACTTATACAGCTTGTACACTCCCACGTGTATCAGCAACAGCAACAGCACATCCCCTCTCGTCAGAGGCACAACCCCAAAATCTTTTTCCAAAATTAATAAGTGGCATAGAAGACCAGAGGGATATGATCCCTGTGCATCCGGTTACACTGAAGTTTACCTAAACAGGCCAGAAGTCCAAAGGGCACTACATGCTAATGTCACCAAAATTTCCTATCCATGGACTCACTGCAGTAATGCTATCCAAGATTGGACTGACGGGCCGGCATCCATTCTTCCTGTCATCAAGAAACTTGCTGCTGGTGGTCTGCGCATTTGGGTTTACAGTGGAGATACTGATGGAAGAGTTCCTGTGACTGGAACAAGATACGCTTTGAAAAAGATGGGGCTCCCCATTGTTGAAGATTGGACTCCCTGGTATACTAGCCAACAGGTTGGAGGATGGAGAACGATTTATGATGGGCTTACTTTTGTGACCATAAGAGGTGCTGGCCATGAAGTTCCAACCTACACTCCCAAACCAGCTCTGCAGCTGCTACGACACTTCCTTGCAAATAAGAAATTACCATCTCAACCAATTTAA 1458 0.4314 MASSSLISNILFLLLLSFTKEALSVSKLSLTGDHNYISREILAEQEADRVYELPGQPPVKFKQYAGYITVNETHGRALFYWFFEATHQPHKKPVLLWFNGGPGCSSIGFGEAEELGPFFPQDSFQPKLKLNPYSWNNAANLLFLESPVGVGFSYTNTSRDLYELGDAITAKDSHTFIVNWFRRFPQFRSHEFYIAGESYGGHYVPQLSELIFDHNSNRAKKDYIRFKGFMIGNAAIDNEADQKGLVEYAWYHAVISDGLYQNITSNCNFKFENQTNECDHYMDKFFSAYGVIDLYSLYTPTCISNSNSTSPLVRGTTPKSFSKINKWHRRPEGYDPCASGYTEVYLNRPEVQRALHANVTKISYPWTHCSNAIQDWTDGPASILPVIKKLAAGGLRIWVYSGDTDGRVPVTGTRYALKKMGLPIVEDWTPWYTSQQVGGWRTIYDGLTFVTIRGAGHEVPTYTPKPALQLLRHFLANKKLPSQPI* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0274 485 Gene3D - 383 476 - -
Vra2g0274 485 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 35 484 IPR001563 GO:0004185|GO:0006508
Vra2g0274 485 PANTHER CARBOXYPEPTIDASE 35 484 - -
Vra2g0274 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 143 IPR001563 GO:0004185|GO:0006508
Vra2g0274 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 144 154 IPR001563 GO:0004185|GO:0006508
Vra2g0274 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 180 205 IPR001563 GO:0004185|GO:0006508
Vra2g0274 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 447 460 IPR001563 GO:0004185|GO:0006508
Vra2g0274 485 ProSitePatterns Serine carboxypeptidases, histidine active site. 447 464 IPR033124 GO:0004185
Vra2g0274 485 SUPERFAMILY alpha/beta-Hydrolases 45 480 IPR029058 -
Vra2g0274 485 Pfam Serine carboxypeptidase 54 477 IPR001563 GO:0004185|GO:0006508
Vra2g0274 485 Gene3D - 337 375 - -
Vra2g0274 485 Gene3D alpha/beta hydrolase 44 304 IPR029058 -
Vra2g0274 485 ProSitePatterns Serine carboxypeptidases, serine active site. 194 201 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0274 Vra-Chr2 2064681 2067311 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0274 340 480 Calmodulin-binding Proteins AT2G22960 28.169 9.85e-15 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0274 K16297 - gmx:100797264 773.081