Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0255 ATGAACGACCAATTTTCAATGGCCGTTCATGGCGGCGACACAAAGTTTCACGACAAGTTTTCAGAGTCCAAATTTCTTACCTTTATCGGTGCCCATGAAATTTTCACAGTGGAGACGTGGAAAGCAGCTTTGGTAGAGTTAATTGCAACTGGTGCACTAATGTTCACCCTAACGAGTTGCACAATTGCATGTTTGGAATCACACGAGTCCGATCCCAAGCTTCTTATTCCCTTTGCAGTGTTCATCATAGTGTTCTTGTTTTTAATTGTGATAGTTCCTCTATCCGGGGGTCATATGAACCCTATTTTCACGTTCGTTGCGGCTCTAAAGGGTATTGTCACCCTTTCTCGTGCTCTCCTTTACGTCCTGGCACAGTGCATTGGCTCAATAATTGGTTTCTTTGTACTAAAGAGTGTGATGGAGCCAAAATTAGCACACACTTATTCTCTGGGAGGTTGTGCGATTGGTGACAAAGGACAAGGTTCTTCCATAAACGCGCAGGATGTTTTGTTGTTGGAATTCTCTTGCACGCTTCTGGTACTCTTTGTCGGTATCACGCTGGCATTTGATAAGAAAAGGAGCAAGGAATTGGGCTTTCCAATGGTGTGTTTCGTGGTAGCAGCATCCCTCGCACTCGCAGTTTTTCTGTCGTTAACTGTAACAAGGAGGCCTGGTTATGCAGGTGCGGGCCTCAACCCGGCAAGATGTTTGGGCTCGGCGTTACTTCACGGAGGCTCACTATGGAATGGGCATTGGATTTTCTGGGTCGGGCCTTTCTTGGCCTGCATAATCTATTACAGTGTCTCCATTAGTTTACCAAAGAAGGGTTTGAATTGGGTGGATGGAGAATATGATATCTTCAACTTGGCTATGGGTTTTTGTGGAACCATCCCTAACACTTCCGTTTTAAACGATCTTCCATGA 924 0.4513 MNDQFSMAVHGGDTKFHDKFSESKFLTFIGAHEIFTVETWKAALVELIATGALMFTLTSCTIACLESHESDPKLLIPFAVFIIVFLFLIVIVPLSGGHMNPIFTFVAALKGIVTLSRALLYVLAQCIGSIIGFFVLKSVMEPKLAHTYSLGGCAIGDKGQGSSINAQDVLLLEFSCTLLVLFVGITLAFDKKRSKELGFPMVCFVVAASLALAVFLSLTVTRRPGYAGAGLNPARCLGSALLHGGSLWNGHWIFWVGPFLACIIYYSVSISLPKKGLNWVDGEYDIFNLAMGFCGTIPNTSVLNDLP* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0255 307 Pfam Major intrinsic protein 35 263 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vra2g0255 307 PANTHER AQUAPORIN-LIKE 16 302 - -
Vra2g0255 307 Gene3D Glycerol uptake facilitator protein. 27 275 IPR023271 -
Vra2g0255 307 PRINTS Major intrinsic protein family signature 41 60 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vra2g0255 307 PRINTS Major intrinsic protein family signature 80 104 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vra2g0255 307 PRINTS Major intrinsic protein family signature 117 136 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vra2g0255 307 PRINTS Major intrinsic protein family signature 213 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vra2g0255 307 PRINTS Major intrinsic protein family signature 252 272 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vra2g0255 307 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 16 302 - -
Vra2g0255 307 SUPERFAMILY Aquaporin-like 37 264 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0255 Vra-Chr2 1972093 1973312 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0255 9 264 Major Intrinsic Protein MIP AT2G37180 27.985 1.28e-21 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0255 K09866 - gmx:100797262 469.544