Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0247 ATGGCATGGAAGTGGCAGAAAGAGGTTACAAAGTACCAAAGGAAGAGACTTGTCTGGCCAAAGATTCAAGAAAATGCATTAACAGCAGAAGGTTGCAGCGTGTGGACGAAGGCTGAAAAGGGTCACTTTGTCGTATACAGCATGGATAAGAAGCGCTTCGTGCTTCCATTACTGTATTTGAAAAACAACATTTTCAGAGAGCTTTTCAAGTTGGCAGAAGAAGAGTTTGGTCTTTCTAGCAACGTGCCTTTAACGTTGCCTTGTGAAGCCACGTTAATGGAGTACGTGATAACGTTGATACAGAGAAACGTAACTAAGGATCTGGAAGAAGCTGTCTTGATGTTTATAGCTACCGTTCGATGCCAATCGTCCTTCGATCTTCTTCCTGAACCAACCAACCAACGTTTGCTTTGCAGCTACTGA 423 0.4326 MAWKWQKEVTKYQRKRLVWPKIQENALTAEGCSVWTKAEKGHFVVYSMDKKRFVLPLLYLKNNIFRELFKLAEEEFGLSSNVPLTLPCEATLMEYVITLIQRNVTKDLEEAVLMFIATVRCQSSFDLLPEPTNQRLLCSY* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0247 140 PANTHER AUXIN-RESPONSIVE PROTEIN FAMILY, PUTATIVE-RELATED 1 140 - -
Vra2g0247 140 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 1 140 IPR003676 GO:0009733
Vra2g0247 140 Pfam Auxin responsive protein 13 100 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0247 Vra-Chr2 1915862 1916284 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0247 40 108 Calmodulin-binding Proteins AT5G20810 38.571 1.77e-10 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0247 - - gmx:100803097 209.534
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0247 2 1915862 1916284 Vra2g0247 2 1915862 1916284 ECH