Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0246 ATGATAAGTGCAAAGAGGCTTATTGAAATGGCAAGAAAGTGGCAGAAAATGGCTGCGGGAAAACGCAAGAGAATTTCCTACCCAAGGCAGCATGATCTTCATCGTGTTCATTCTTCAACACCAAACAAGGGTCATTTCGTGGTTTACAGCGTTGATCATAAGCGATTCGTGGTTCCCCTTAAGTATCTCACCACCAGCGTGTTCAAAGAGCTTCTGAAATGGTCGGAAGAGGAGTTTGGTTTACCATCTGATGGACCCATTACGTTACCTTGTGACAGCGTCTTCTTGGAGTACGTAATCTCGTTGATTCGGGAACATGTTCCCGAAGATGTTGAGAAGGCTTTGATCACTTCAATGATTACGTGTCACCAGTTGGCATCGTCTTCTTCTTCTCGTAGCAATGGTCTTATGCAGAGCAACGGGAAAATGATTATTTATGGCTTTTGA 447 0.4385 MISAKRLIEMARKWQKMAAGKRKRISYPRQHDLHRVHSSTPNKGHFVVYSVDHKRFVVPLKYLTTSVFKELLKWSEEEFGLPSDGPITLPCDSVFLEYVISLIREHVPEDVEKALITSMITCHQLASSSSSRSNGLMQSNGKMIIYGF* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0246 148 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 1 148 - -
Vra2g0246 148 Pfam Auxin responsive protein 12 103 IPR003676 GO:0009733
Vra2g0246 148 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 1 148 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0246 Vra-Chr2 1913914 1914634 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0246 6 107 Calmodulin-binding Proteins AT5G20810 29.231 2.05e-11 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0246 - - gmx:100802572 212.616