Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0213 ATGGCAGAGAGTGTAGTTTCTTTTGTTTTAGATCACTTATCCCAGCTTGCCGCACGCGAAGCTAACTTGCTCTATGGCGTGGAGGATAGAGTCCAGTCCCTTCAGTACGAACTTCAAATGATCAAAGATCTTCTCAATACCACAAAGAGAAAGAAGGGAATGGAACATACTGTATTGAACCAAATCAGAGATGTGGCCCACTTAGCTGAGGATGTCATCGACACATTCGTAACAAAAGTTGCCATTTACAAGAGGAGAACCATTCTGGGGAGGATGCTCCATGGCTTTGGCCAAGCAATGTTGCTCCACCACGTAGCCCACAAAATAGACAAGTTCAAAACCACTCTCAACGAGATACGCGAGAACAAGGACAAATATGATGCTTTCATAGAAGCCACTAATCAATCCGCAGTAGAAGAGGAAGAGGAGAAGGAAAGGTTGCAATCGTTGCACAAGCTAAGAAGAGATGTGGAGGAAGAACACGTGGTCGGCTTTGTCCAGGACTCCAAGGATGTGGTCATGCGACTCCAGGAAGGTGGTTCAAATCGTAGAGTTGTCTCTATCGTTGGCATGGGGGGATTGGGGAAGACTACCCTTGCCCGAAAGGTCTACAATAGCAGTCAGGTGAAGAACCAGTTCAATTGTCGTGCGTGGGTTTATGTCTCAAACGAGTGCAGAGCTAGGGAGCTTTTACTTGGCCTTCTTAAGCATTTGATGCCAAATTTTCAACAACAACGCAACGACAACAAGAGAGGTAAGAAAAACGCCGAAGATGTTAACAACCCGAGTGAGGAGGAGCTGAAGAAACAGGTGTTTGACTGCTTGGAGAGTAAAAAGTATCTTGTGGTGGTAGATGACTTGTGGAAAATGAGGGATTGGGATAAGGTGCAAGATGCTTTTCCAAACAACAACAACGGAAGCAGAATATTGATAACTAGTCGTTTGAAAGAGGTGGCCTTGCATGCTGGTGATGATGTTCCTCATTATCTTAAGTTTTTGAGTGAAGAAGAAAGTTGGGAGCTGTTTTGCAGGAAAGTGTTTAAGGGTGAAAATCGGCCTTCTGATTTGGAAACCCTAGGAAAGCAAATGGTTCAAAGTTGTCGTGGTTTGCCGCTCTCCGTCATTGTTTTAGCAGGGCTGCTAGCCAAGAAGGAAAAGTCACATAGAGAATGGTCTAAAGTGGAAGGTCATGTTAACTGGTATCTCACTCGAGATGAAACCCGAGTGAGGGATATACTCAAGCTCAGCTACGACAACTTGCCAAGGAGACTAAAACCCTGTTTTCTCTATCTTGGGTTATTTCCTGAAGATTTTGAAATACCTGTTACGTCATTATTGCAAATATGGGTTGCAGAGGGTTTCATACAAGATACAGGAAATAGAGACCCAGATGATGTTGCAGAAGACTACTTGTACGAACTCATCGATCGCAGTTTGGTCCAGGTAGTAAAAGTGAAGTTGAATGGAGGTTTGGCAACGTGTCAGGTTCATGATCTTGTTCGAGATCTTTGCATATCAGAGAGCAAAAAGGACAACATGTTTGAAGTTTGTACAGACAACAACATTCTAATCCCTACCAAGCCTCGGAGACTATCCATTCAGAGTGACATGGGTCACTACATTTCTTCAAGCAACAATGACCATTCATGTATTCGTTCCCTATTTTTCTTTGATCCATGGCATTATATTCATAGGAGAGAGTGGAAATGGCTTTTGGACGACTTCAAATTGGTTCGAGTGTTAGAGATTGAATCTCACTGGTGCTATAAGTTCCCTTCCAAATTAGGAAACTTCATCAACTTAAGGTACTTAAGAATAGAATCAGTTTCTTCATTTGTTCCAGATTCAATACTTAACCTTTGCAATCTACAAACCATAAACATGGGTATTTGGAAAGATGAAAATCCAATTTCTTTCCCTATTCAAATGTGGAAACTCAAACATTCAAGGCATTTGAATTCAGTATGTTCTCTCAAATTGCGAGGAAGATGTTCAGATGAGAAGATGTGGAATCTTCAAACCATTTCTCCCCTTAGGCTCAATACAGAAGCAACATCTCTAATAAAGAAAGGAACATTCCCTAATATTAAGAGGATAGGGTTGTATGTGAATGGTTGTGAAGATGAATTATCCAAATTATTGCCGAACCTACAACAATTCAAACATTTGAATAAATTGATGATTCATAAGGCTTTGAAGCTTCTAACCTCTGAGGTCATATTTCCCTCAAGCATTACAGAGTTATCATTGTCAATGATTAGGTGCATTACTGATGAGGGGATGAATAGTTTGAGAAATCACTCTAAAATCAAAATTTTGAGACTTTCTGGGGATGATAAATGGGTTGGGAGTACCATTGACCTCAATTGTGTGGATGGCAGCTTCCCACAGTTAGAAGTATTGGAAATGGAATCTTTGTTAGTTCGAAAGTGGGAATTAGGCCATGGTGCAATGCAGAGGCTTCAAGATGTCTTTATCCACCGTTGTCCAGTATTAGATAATCTGCCAACTGAACTTTGTTCTTTGAAAGGATTGAGAAAAGTACAAATAACGGGATCTTCCATCGAAGAAATGGCTCACATTTTAAGAATTTTAGAAACAGATAATGGAGTTCAAGTCATTACAAAGAATCCTCCACCTAGAGATGATAGTGATTTTATTTTAAATATTTACTAG 2676 0.4073 MAESVVSFVLDHLSQLAAREANLLYGVEDRVQSLQYELQMIKDLLNTTKRKKGMEHTVLNQIRDVAHLAEDVIDTFVTKVAIYKRRTILGRMLHGFGQAMLLHHVAHKIDKFKTTLNEIRENKDKYDAFIEATNQSAVEEEEEKERLQSLHKLRRDVEEEHVVGFVQDSKDVVMRLQEGGSNRRVVSIVGMGGLGKTTLARKVYNSSQVKNQFNCRAWVYVSNECRARELLLGLLKHLMPNFQQQRNDNKRGKKNAEDVNNPSEEELKKQVFDCLESKKYLVVVDDLWKMRDWDKVQDAFPNNNNGSRILITSRLKEVALHAGDDVPHYLKFLSEEESWELFCRKVFKGENRPSDLETLGKQMVQSCRGLPLSVIVLAGLLAKKEKSHREWSKVEGHVNWYLTRDETRVRDILKLSYDNLPRRLKPCFLYLGLFPEDFEIPVTSLLQIWVAEGFIQDTGNRDPDDVAEDYLYELIDRSLVQVVKVKLNGGLATCQVHDLVRDLCISESKKDNMFEVCTDNNILIPTKPRRLSIQSDMGHYISSSNNDHSCIRSLFFFDPWHYIHRREWKWLLDDFKLVRVLEIESHWCYKFPSKLGNFINLRYLRIESVSSFVPDSILNLCNLQTINMGIWKDENPISFPIQMWKLKHSRHLNSVCSLKLRGRCSDEKMWNLQTISPLRLNTEATSLIKKGTFPNIKRIGLYVNGCEDELSKLLPNLQQFKHLNKLMIHKALKLLTSEVIFPSSITELSLSMIRCITDEGMNSLRNHSKIKILRLSGDDKWVGSTIDLNCVDGSFPQLEVLEMESLLVRKWELGHGAMQRLQDVFIHRCPVLDNLPTELCSLKGLRKVQITGSSIEEMAHILRILETDNGVQVITKNPPPRDDSDFILNIY* 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0213 891 Gene3D - 139 326 IPR027417 -
Vra2g0213 891 MobiDBLite consensus disorder prediction 247 264 - -
Vra2g0213 891 Coils Coil 130 160 - -
Vra2g0213 891 SUPERFAMILY L domain-like 495 859 - -
Vra2g0213 891 Pfam Rx N-terminal domain 5 81 IPR041118 -
Vra2g0213 891 CDD RX-CC_like 2 121 IPR038005 -
Vra2g0213 891 Gene3D - 332 421 IPR042197 -
Vra2g0213 891 MobiDBLite consensus disorder prediction 243 264 - -
Vra2g0213 891 PRINTS Disease resistance protein signature 185 200 - -
Vra2g0213 891 PRINTS Disease resistance protein signature 274 288 - -
Vra2g0213 891 PRINTS Disease resistance protein signature 367 381 - -
Vra2g0213 891 Gene3D Ribonuclease Inhibitor 561 869 IPR032675 -
Vra2g0213 891 Gene3D - 5 113 - -
Vra2g0213 891 Gene3D - 422 506 IPR036388 -
Vra2g0213 891 Pfam NB-ARC domain 171 419 IPR002182 GO:0043531
Vra2g0213 891 PANTHER - 45 857 - -
Vra2g0213 891 PANTHER DISEASE RESISTANCE PROTEIN RP 45 857 IPR044974 GO:0006952
Vra2g0213 891 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 431 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0213 Vra-Chr2 1600892 1603766 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0213 184 503 WRKY Transcription Factor Family AT5G45050 23.148 6.96e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0213 - - vra:106756629 1796.56