Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0212 ATGGCAGACAGTGTAGTTTCTTTTGTTTTAGATCACTTAGCCCAACTTGCCGCACGTGAAGCTAACTTGCTCTATGGCGTGGAGGATAGAGTCCAGTCCCTCCAATACGAACTTCAGATGATCAAAGAGCTCCTCAATACCACTAAGAGAAAGAAGGGAATGGAACATACTGTTTTGAACCAAATCAGAGATGTGGCCCACTTGGCTGAGGATGTCATCGACACATTCGTAGCCAAAGTTGCCATTTACAAGAGGAGAACCATTATGGGAAGGATGCTTCGTGGCTTTGGCCAAGCAAGGTTGCTCCACCAGGTAGCCGACAAAATAGACAAGCTCAAAACCACTCTCAACGAGATACGCGATAACAAGGATAAATATGATGCTTTTAGAGAAGCCACTAATCAATCCTCAAGAGAAGAGGAGGAGGAGGAGGAAAGGTCGCAATCGCTACACAAGCTAAGAAGAGAAGTGGAGGAAGAACATGTTGTTGGCTTCTTCCATGACTCCAAAGATGTCATCCAGCGACTCCAGGAAGGTGGTTCAAATCGTAAAGTTGTCTCTATCGTTGGCATGGGGGGATTGGGGAAGACCACCCTTGCCCGAAAGGTCTATAATAGTAGCCAGGTGATGAACCACTTCAATTGTCGAGCATGGGTTTATGTCTCAAACGAGTGCAGAGTTAAAGAGCTTTTGCTTGGCCTTTTTAAGCATTTGATGCCAAATTTTGAACAACAACGCAGAGGCAACAAGAAGGGTAACAAAAGCGTCGAAGATGTTAACAGCCTGAGTGAGGAGGAGCTGAAGAAACATGTGTTGAAATGCTTGGAGAGGAAAAGGTATCTCGTGGTGGTAGATGACTTGTGGAAAAGCCGGGATTGGGATGAGGTGCAAGATGCTTTTCCGGACAACAACAACGGGAGCAGAATATTAATCACTAGTCGTTTGAAAGAGGTGGTCTTGCATGCTGGTGATGATGTTCCTCACTATCTTCAATTCCTGAGTGAAGAAGAAAGTTGGGAGTTGTTTTGCGGGAAAGTGTTTAGGGGTGAAAATTGCCCTTCTGATTTGGAGATCCTGGGAAAACAGATGGTTCAAAGTTGTCGTGGTTTGCCGCTCTCCATCATTGTTTTAGCAGGGATGCTAGCGAAGAAGGAAAAGTCAGATAGAGAATGGTCTAAAGTGGTAGGTCATGTTAATTGGTATCTGACTCGAGATGAGACCCAAGTGAAGGATATAGTTCTCAAGCTCAGCTACGACAACTTGCCAAGGAGATTAAAACCATGTTTTCTTTATCTTGGGTTATTTCCTGAAGATTTTGAAATACCTGTTATGCCATTATTGCAAAAATGGGTTGCGGAGGGTTTTATACAAGATACAGGAAATAGAGACCCAAATGATGTTGCGGAAGACTACTTGTACGAGCTCATAGATCGAAGTTTGATCCAGGTAGCAAGAATGAAGTCTAATGGAGGTTTGGCAAGGTGTCAAATTCATGATCTTCTTCGAGATCTTTGCATATCAGAAAGCAAAGAAGACAAAGTGTTTGAAATTTGTACAGACAATAACATTCTAATCCCTATCAAACCTCGCAGACTGTCCATTCAGAGTGGCATGGGTCACTACATTTCTTCAAGCAACAATGACCATTCATGTATTCGTTCCCTGTTTTTCTTTGGATCGGAGTATAATGTTGGTAGGAGAGAGTGGAAATGGCTTTTGGACGACTTCAAATTGGTTCGAGTGTTATATTTTGGATCTAACAGGTGCCAAAATATCCCTTCCAATTTAGGGAACTTCGTCCACTTAAGGTACTTGAAAATAAACTCACGGGATGTTAACTTTATTCCAGATTCAATACTTAACCTTTGGAATCTACAAACCATAGAGTTGGGTACTTATATGTTTGATGGTCAAATTTCTTTCCCTGGTCAAATATGGAAACTCAAGCATTTAAGACATTTGAATACATCAAGGCCTATCAAGTTGCGAGGAAGATGTTCAGAATCAGATGAGAAGATGTGGAATCTTCAAACCATCTCTCTCCTTATACTCAATACGCAAACAACATTTCTAATAAAGAAAGGAACATTTCTCAATGTTAAGAGGATGAGGTTGTATTCAGATATGTCTCGTTATGAACCCAATTTATTGCAGAACCTACAACAATTAAAGCATTTGAATAAATTGATAATTGATAATGTTTGGAACCTCCTAACCTCTGAGGTCATATTTCCCCCAAGCATTACAGAGTTATCATTGTCAAGGATTAAGTGCATTACTGATGAGGGGATGAATGGTTTGAGAAATCACTCTAAAATCAAAATTTTGAAGCTTCTGGGTTTTGAAATCTATATGAGATCCATTGACCGCCGCTATACGAGTTCCATTGACCTCAATTGTGTGGATGGTGACTTCCCACAACTGGAAGTGTTGGAAATGAAATATTTGACACTTGGAAAGTGGAAATTAGGCAATGGTGCGATGCAGAGACTTCAAAATGTGATTATCCACGATTGTCAACAATTAGATGATCTCCTACCTGATTTTTGTTCTTTGAATGGATTGAGAAAAGTGCAAATTTCAAAATCTCCCTTAGAACAAATAGCTCACATCTTACAAATTTTAGAAACAAATAATGGAGTTCAAGTTGTTAGAGATAATCATCCCAAGGTGGATGAGAGTGATTGGATTTTAAATATTTACTAG 2706 0.4047 MADSVVSFVLDHLAQLAAREANLLYGVEDRVQSLQYELQMIKELLNTTKRKKGMEHTVLNQIRDVAHLAEDVIDTFVAKVAIYKRRTIMGRMLRGFGQARLLHQVADKIDKLKTTLNEIRDNKDKYDAFREATNQSSREEEEEEERSQSLHKLRREVEEEHVVGFFHDSKDVIQRLQEGGSNRKVVSIVGMGGLGKTTLARKVYNSSQVMNHFNCRAWVYVSNECRVKELLLGLFKHLMPNFEQQRRGNKKGNKSVEDVNSLSEEELKKHVLKCLERKRYLVVVDDLWKSRDWDEVQDAFPDNNNGSRILITSRLKEVVLHAGDDVPHYLQFLSEEESWELFCGKVFRGENCPSDLEILGKQMVQSCRGLPLSIIVLAGMLAKKEKSDREWSKVVGHVNWYLTRDETQVKDIVLKLSYDNLPRRLKPCFLYLGLFPEDFEIPVMPLLQKWVAEGFIQDTGNRDPNDVAEDYLYELIDRSLIQVARMKSNGGLARCQIHDLLRDLCISESKEDKVFEICTDNNILIPIKPRRLSIQSGMGHYISSSNNDHSCIRSLFFFGSEYNVGRREWKWLLDDFKLVRVLYFGSNRCQNIPSNLGNFVHLRYLKINSRDVNFIPDSILNLWNLQTIELGTYMFDGQISFPGQIWKLKHLRHLNTSRPIKLRGRCSESDEKMWNLQTISLLILNTQTTFLIKKGTFLNVKRMRLYSDMSRYEPNLLQNLQQLKHLNKLIIDNVWNLLTSEVIFPPSITELSLSRIKCITDEGMNGLRNHSKIKILKLLGFEIYMRSIDRRYTSSIDLNCVDGDFPQLEVLEMKYLTLGKWKLGNGAMQRLQNVIIHDCQQLDDLLPDFCSLNGLRKVQISKSPLEQIAHILQILETNNGVQVVRDNHPKVDESDWILNIY* 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0212 901 SUPERFAMILY L domain-like 497 867 - -
Vra2g0212 901 Coils Coil 102 122 - -
Vra2g0212 901 PANTHER DISEASE RESISTANCE PROTEIN RP 43 866 IPR044974 GO:0006952
Vra2g0212 901 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 432 IPR027417 -
Vra2g0212 901 CDD RX-CC_like 2 121 IPR038005 -
Vra2g0212 901 PRINTS Disease resistance protein signature 185 200 - -
Vra2g0212 901 PRINTS Disease resistance protein signature 274 288 - -
Vra2g0212 901 PRINTS Disease resistance protein signature 367 381 - -
Vra2g0212 901 Pfam NB-ARC domain 170 420 IPR002182 GO:0043531
Vra2g0212 901 Gene3D Ribonuclease Inhibitor 540 881 IPR032675 -
Vra2g0212 901 PANTHER - 43 866 - -
Vra2g0212 901 MobiDBLite consensus disorder prediction 131 150 - -
Vra2g0212 901 Gene3D - 5 106 - -
Vra2g0212 901 Gene3D - 418 508 IPR036388 -
Vra2g0212 901 Gene3D - 143 325 IPR027417 -
Vra2g0212 901 Coils Coil 140 160 - -
Vra2g0212 901 Gene3D - 332 417 IPR042197 -
Vra2g0212 901 Pfam Rx N-terminal domain 5 81 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0212 Vra-Chr2 1593181 1596145 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0212 184 504 WRKY Transcription Factor Family AT5G45050 23.385 1.32e-06 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0212 - - vra:106756629 1356.66