Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0192 ATGGATGCCCCCAAGGATCATCAAAATGTTGTAACCATAGATGTCCATGCTGCTAAAAATCTGCTAAATTCATCAGATTATCGTTATCTGGATGTGAGGTCGGTTGAGGAATTCAATAAAAGCCATGCTGAGAATGCTTATAATGTCCCCTACATGTTCATCACAGAAGCAGGTAAAATGAGCTTAAAGGGGCAGTATAAAAGTATCAAAATCTGGGGACGGGTGAAAAATCCAGATTTTGTTGAGCAGGTGGCAGCAATATGCGAGAATGAGGATCATTTGATTGTGGCTTGCAACAGCGGAGGAAGATCACTCCGAGCCAGCGTTGACTTGCTTGATTCGGGATTTAAACATGTTGTGAATATGGGAGGAGGCTACTCTGCATGGGTTGATGCTGGATTTGCTGGGGACAAGCCACCAGAAGAGCTCAAAACTAGTTGTAAGATTCGTCGTTAA 456 0.432 MDAPKDHQNVVTIDVHAAKNLLNSSDYRYLDVRSVEEFNKSHAENAYNVPYMFITEAGKMSLKGQYKSIKIWGRVKNPDFVEQVAAICENEDHLIVACNSGGRSLRASVDLLDSGFKHVVNMGGGYSAWVDAGFAGDKPPEELKTSCKIRR* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0192 151 PANTHER THIOSULFATE SULFURTRANSFERASE 18 72 149 IPR044684 GO:0003824
Vra2g0192 151 PANTHER THIOSULFATE SULFURTRANSFERASE 18 5 60 IPR044684 GO:0003824
Vra2g0192 151 ProSiteProfiles Rhodanese domain profile. 23 138 IPR001763 -
Vra2g0192 151 CDD RHOD 18 130 - -
Vra2g0192 151 Gene3D - 2 135 IPR036873 -
Vra2g0192 151 Pfam Rhodanese-like domain 17 131 IPR001763 -
Vra2g0192 151 PANTHER PROTEIN HIGH ARSENIC CONTENT 1, MITOCHONDRIAL-RELATED 72 149 - -
Vra2g0192 151 PANTHER PROTEIN HIGH ARSENIC CONTENT 1, MITOCHONDRIAL-RELATED 5 60 - -
Vra2g0192 151 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 8 134 IPR036873 -
Vra2g0192 151 SMART rhod_4 13 135 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0192 Vra-Chr2 1435337 1436871 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0192 8 142 Sulfurtransferasese or Rhodanese AT5G66170 42.336 1.78e-31 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0192 K22547 - gmx:100794624 242.276