Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0190 ATGTTAGGTGCTTTGGACGAAACTACCCACATTTTCAAATCAAAGTTACCAGACATACCACTTCCTAATAACCTCCTCCTCCACGAATACTGCTTCCTTAAACTTCCCGATGTCGCCCACCGCACATGCCTCATCTCCGCCGCCAGATCCTACACCTACGCCGACACTCACGGCGCCTCGCGGAAGGTGGCCGCCGGCATGTCCAAGCTGGGCATCCAGAAGGGCGACGTCGTCATGATTCTCCTCCCCAACTCCCCGGAGTTCGTGTTCACCTTCATGGCGCTCTCCATGCTCGGCGCCGTCGCCACAACCGCCAACCCCTCCTACACCGCCGCCGAACTCTCCAAACAACTAGCCGTCTCCAACGCCAAGCTCGTCGTCACCCTCTCCGCCCACGTCCACAAGCTCGATCAGCAAGCGCAGCACCACTTCTTCAAGGTGGTCACCGTCGACGACCCACCGGAGAATTTCTCGGCTTTCCCGGAGGGTGAAGAGAGTGAGGTTCCCGAGGTTGAGATATCAGTGGAGGACACGGTGGCGCTGCCGTTTTCGTCGGGGACGACGGGGCTAGCGAAGGGGGTGATTCTGACGCACAAGAGTTTGGTAACCAGCGTGGCGCAACAGATGGAGGGAGAGAACCCGCACATGTATCTGAAAGAAGAGGACGTTGTGCTGTGCGTGCTTCCTCTCTTTCACATATTCGCCATGCACATCGTGATGATGTGCGGGATGAGAGCGGGGAGTGCCATTTTGCTGATCGAGAAGTTTGAGATGAGGGCGCTGCTGGATGCGATTGAGCGGCACAGGGTGACGGTGGCGATTCTGGTGCCGCCCCTGGTGGTAGCACTTACGAAGAACAGCGCGGTGGAGGAGTACGATTTGAGTTCAATACGATTGGTGATGTCGGGGGCTGCGCCGCTGGGGCTACAGGCGGAGGAGGCTCTGCGGAACAGGTTGCCTGACGCCATTATAGGACAGGGCTATGGGATGACAGAGAGTGGACCAGTCTTGACCATGTCTCTGGGTTTTGCAAAGTTTCCATTTCCAACCAAGTCTGGTTCGTGCGGAACTGTGGTGAGAAATGCTGAAATGAAGATCATTGACCCTCTGACTTCCTTCTCTCTTCCCCGTAACCACCATGGCGAGATTTGCGTCCGTGGCTCTCAGATGATGAAAGGGTACCTGAATGACGAGAAGGCCACTGCAGAAACCATTGATGCAGATGGTTGGCTTCATACAGGTGACATTGGCTACGTTGATGATGACGATGAGGTTTTCCTCGTTGACAGGGCCAAAGAACTCATCAAATTCAAAGCCTTCCAGGTGCCGCCGGCAGAACTTGAAGACCTTCTCAGGAGCCACCCTTCCATTGCAGATGCAGCTGTTGTCCCGCAAAAAGACGACGCTGCTGGCGAAGTTCCAGTCGCTTTCGTTGTTGCCTTTGATCTTACAGAAGATGCTGTAAAGGATTTTGTAGCTAAACAGGTAGTGTTTTACAAGAAGATACACAAAGTGTATTTTGTTGATGCAATTCCAAAGTCTCAGACTGGAAAGATATTAAGAAAAGAACTGAGAGCAAAGCTGGACAGCATTATTGAGCACAACTAA 1608 0.5348 MLGALDETTHIFKSKLPDIPLPNNLLLHEYCFLKLPDVAHRTCLISAARSYTYADTHGASRKVAAGMSKLGIQKGDVVMILLPNSPEFVFTFMALSMLGAVATTANPSYTAAELSKQLAVSNAKLVVTLSAHVHKLDQQAQHHFFKVVTVDDPPENFSAFPEGEESEVPEVEISVEDTVALPFSSGTTGLAKGVILTHKSLVTSVAQQMEGENPHMYLKEEDVVLCVLPLFHIFAMHIVMMCGMRAGSAILLIEKFEMRALLDAIERHRVTVAILVPPLVVALTKNSAVEEYDLSSIRLVMSGAAPLGLQAEEALRNRLPDAIIGQGYGMTESGPVLTMSLGFAKFPFPTKSGSCGTVVRNAEMKIIDPLTSFSLPRNHHGEICVRGSQMMKGYLNDEKATAETIDADGWLHTGDIGYVDDDDEVFLVDRAKELIKFKAFQVPPAELEDLLRSHPSIADAAVVPQKDDAAGEVPVAFVVAFDLTEDAVKDFVAKQVVFYKKIHKVYFVDAIPKSQTGKILRKELRAKLDSIIEHN* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0190 535 Pfam AMP-binding enzyme 40 437 IPR000873 -
Vra2g0190 535 Pfam AMP-binding enzyme C-terminal domain 446 518 IPR025110 -
Vra2g0190 535 ProSitePatterns Putative AMP-binding domain signature. 181 192 IPR020845 -
Vra2g0190 535 CDD 4CL 21 524 - -
Vra2g0190 535 Gene3D - 431 531 IPR045851 -
Vra2g0190 535 Gene3D - 4 430 IPR042099 -
Vra2g0190 535 PANTHER 4-COUMARATE--COA LIGASE 3 10 527 - -
Vra2g0190 535 SUPERFAMILY Acetyl-CoA synthetase-like 17 530 - -
Vra2g0190 535 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 10 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0190 Vra-Chr2 1427653 1430227 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0190 11 463 Monolignol Biosynthesis Gene Families AT3G21240 60.173 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0190 K01904 - gmx:100790396 838.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0190 2 1427653 1430227 Vra2g0190 2 1427653 1430227 ECH