Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0183 ATGCCCACTGCTAATCCGACATGTCCACCACCAATGAAGGCCACCTCCAACGGTGCCTTCCAACATGAAAATCCATTGGATTATGCGCTTCCCCTTCTAATCCTTCAGATATGTCTCGTCGTTGTCTTCACAAGATTCATTGCATTCATTCTCAAACCTCTCAGACAACCCAGAGTTATTGCAGAGGTTATTGGAGGGATATTACTTGGGCCATCAGCGATTGGGAGGAATGAGAAATTCCTGAACACGATTTTCCCCAAGAATAGCTTGACTGTGCTTGAAACTGTGGCCAATCTGGGTCTTCTGTTCTTCTTGTTTCTGGTTGGGCTTGAGCTTGACATGCGTTCGATACGCAGAACTGGTCACAAGGCCTTAGCCATTGCCGTTGCAGGCATCACATTGCCTTTTGTGCTCGGCATTGGCACCTCCTATGCTCTTCGAGCCACCGTATCAAAAAAGGCTAATTCAACCTCGTTCCTTATTTTCATGGGTGTTGCCCTCTCCATCACTGCATTTCCCGTCCTTGCACGCATCCTTGCCGAGCTCAAACTCCTCACAACTGATGCTGGTCGCATAGCAATGGCAGCAGCTGCTGTGAATGATGTTGCAGCATGGATACTGCTCGCTCTTGCCATAGCTCTCTCTGGCTCTAACTCATCCCCTCTTGTTTCCTTGTGGGTCATACTCTGTGCTGCTGCTTTTGTCCTCTTGGCTATCTTTGCCATAAAACCCTTGCTCACAATGATGGCCAAGCGTTCCCCTGAGGGTGAACCGGTGCAAGAGATTTACATATGCATCACCTTGACACTGGTCCTGGCTTGCAGTTTTATCACTGATACCATTGGCATTCATGCACTGTTTGGGGCTTTTGTGGTCGGCATAGTCATGCCAAAGGATGGTCCTTTTGCTGGGGTGCTGATCGAGAAGATAGAGGACCTTGTGATGAGTCTGTTGTTGCCACTCTATTTTGTCTCCAGTGGTTTGAAGACTGATGTGACAACCATTAGAGGAACACTTTCATGGTGTATGCTGGTGCTTGTTATATTCACTGCTTGCTTTGGAAAGATCAGTGGCACATTCGTTGTGTCACTTCTATGTAAGGTGCCTTTTAGAGAAGCCTTGGCTCTTGGATTTCTCATGAACACCAAAGGCTTGGTGGAGCTCATTGTTCTCAACATTGGCAAGGATCGCAAGGTTCTGAATGATCAGACATTTGCAATCTGTGTTTTGATGGCACTGTTCACCACTTTCATCACCACCCCAATAGTGATGGCAGTGTATAAACCAGCTCGAAGGGGATCACCATACACGCATAAAACAGTTCAACGCAAGGATCCAGACACAGAGCTAAGAGTGTTGGCGTGCTTCCACAGTACCTACAACATTCCCACCTTGATCAACCTGATAGAGTCATCCCGGGGAACCAGAAAGCGTGGAAAGTTGTGCGTGTATACCATGCACTTGATGGAACTCTCGGAGCGACCATCAGCCATCACAATGGTTCACACGGCACGCAACAACGGCATGCCCTTCTGGAACAAAAAGCACGACAACAAAGATCAAATGGTGGTTGCATTTCAGGGTTATGGCCATCTAAGCAGTGTCAACGTTCGTCCCATGACAGCCATATCTCCCTTCAGCAGCATGCACGAAGACATTTGCACCAGTGCACACCAAAAGCGAGTGGCACTAATTCTCCTCCCTTTTCACAAACACCAGCACTTTGATGGGACAATGGAGTCACTGGGAAACTCATTGCATGTGATGAACGGCCATGTCCTCAGCCGTGCTCCTTGCTCTGTGGGAATTTTGGTTGATCGTGGACTTGGAGGGACAAGACAAGTCCAAGCGAGCGATGTGTCGTACGATGTTGTTGTAGGGTTCTTTGGAGGAAGAGATGATCGTGAAGCACTTGCATATGGAATGAGACTTGCCGAACATCCTGGTATCTCACTCACTGTTGTGAAGTTTGTGGCTGCACCTGGTCAAACATTCGCCTTTGGTGCCAAATTGATCGGTATAACAGCGAACAAGGACAGGAAGATAATAAACGTGGCTGAGGGAACAGGTAATAGTGACGAAGATAAACAAGAGGATGAACAATTTTGGTCGGAGTTCATGAGTGTGAGATCGAACAACACGGAATCGATTACGTACGAGGAAAGATTGGTGGACAGCAAAGAAGATTTGAAAGCAGTGTTGAGGGAGAAGAATCGGAGCAATCTTATTTTGGTTGGTAGAATGCCGCAAGTGGCACCTTTGGCAGAAAAAAGTGATTGTCCCGAACTTGGTCCCATTGGAAGCTATTTGGCTTCTTCTGAGTTTTCCACTTTCTCTTCAGTTTTAGTGTTGCAGCAATATAATCCTGAAACTGATGTTTATCCCATGGTTATGGAGGTTTCTGATTACATGGATGTGCCAGACACACCAACGGGTTTGAGTTTGTCCGGTTAA 2454 0.4707 MPTANPTCPPPMKATSNGAFQHENPLDYALPLLILQICLVVVFTRFIAFILKPLRQPRVIAEVIGGILLGPSAIGRNEKFLNTIFPKNSLTVLETVANLGLLFFLFLVGLELDMRSIRRTGHKALAIAVAGITLPFVLGIGTSYALRATVSKKANSTSFLIFMGVALSITAFPVLARILAELKLLTTDAGRIAMAAAAVNDVAAWILLALAIALSGSNSSPLVSLWVILCAAAFVLLAIFAIKPLLTMMAKRSPEGEPVQEIYICITLTLVLACSFITDTIGIHALFGAFVVGIVMPKDGPFAGVLIEKIEDLVMSLLLPLYFVSSGLKTDVTTIRGTLSWCMLVLVIFTACFGKISGTFVVSLLCKVPFREALALGFLMNTKGLVELIVLNIGKDRKVLNDQTFAICVLMALFTTFITTPIVMAVYKPARRGSPYTHKTVQRKDPDTELRVLACFHSTYNIPTLINLIESSRGTRKRGKLCVYTMHLMELSERPSAITMVHTARNNGMPFWNKKHDNKDQMVVAFQGYGHLSSVNVRPMTAISPFSSMHEDICTSAHQKRVALILLPFHKHQHFDGTMESLGNSLHVMNGHVLSRAPCSVGILVDRGLGGTRQVQASDVSYDVVVGFFGGRDDREALAYGMRLAEHPGISLTVVKFVAAPGQTFAFGAKLIGITANKDRKIINVAEGTGNSDEDKQEDEQFWSEFMSVRSNNTESITYEERLVDSKEDLKAVLREKNRSNLILVGRMPQVAPLAEKSDCPELGPIGSYLASSEFSTFSSVLVLQQYNPETDVYPMVMEVSDYMDVPDTPTGLSLSG* 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0183 817 Pfam Sodium/hydrogen exchanger family 38 422 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Vra2g0183 817 PANTHER CATION/H + ANTIPORTER 1 810 - -
Vra2g0183 817 Gene3D - 32 434 IPR038770 -
Vra2g0183 817 PANTHER CATION/H+ EXCHANGER 3 1 810 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0183 Vra-Chr2 1396798 1399973 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0183 1 803 Antiporter Super Family AT3G17630 68.696 0.0 1092
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0183 - - gmx:100818975 1343.95