Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0174 ATGAGAGGTTTCAATGAAGAGCATGGTGTTCTGGGGGGAAAGGAGGAAGAAAACGTGTGGCCTTCCTGGCTGCGGCCACTTCTCAAGACCAGTTTTTTTGTTCAATGCAAAGTCCACGCAGATTCCCACAAGAATGAATGCAATATGTATTGCTTGGACTGTGTGAATGGAGCCCTTTGTTCTGCATGTCTTGCTTCCCACAAAGAACACAGAACAATCCAGATAAGGAGATCTTCATACCATGATGTGATAAGGGTGTCTGAGATACAGAAATTTCTGGACATAACAGGCGTCCAAACTTACATTATTAACAGTGCCAAGATTGTGTTCTTGAATGAAAGGCCCCAACCAAGGCCTGGAAAAGGGGTCACAAACACCTGCCAAGTCTGTGACCGCAGCCTTCTTGATTCCTTCAGCTTCTGCTCTCTTGGTTGTAAGATTGTTGGAACCTCCAAAAAGTTCCGGAAGAAGAAAATGTTAGGTGAGACAGAAGGGTCTGATGGTGAAGAATCAGTGAACGGCATAAGCAATGTAAATGCCAGAAGCAAAATCCATAGCTTTACACCTTCAACACCACCACCAACAGTGGCTAATTACAGAACTGCAAAGAGAAGGAAAGGAATTCCACATAGAGCTCCAATGGGTGGAGGGCTCATTATAGAATACAACGTTGTATAG 678 0.4425 MRGFNEEHGVLGGKEEENVWPSWLRPLLKTSFFVQCKVHADSHKNECNMYCLDCVNGALCSACLASHKEHRTIQIRRSSYHDVIRVSEIQKFLDITGVQTYIINSAKIVFLNERPQPRPGKGVTNTCQVCDRSLLDSFSFCSLGCKIVGTSKKFRKKKMLGETEGSDGEESVNGISNVNARSKIHSFTPSTPPPTVANYRTAKRRKGIPHRAPMGGGLIIEYNVV* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0174 225 Pfam PLATZ transcription factor 76 147 IPR006734 -
Vra2g0174 225 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 12 217 - -
Vra2g0174 225 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 12 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0174 Vra-Chr2 1337762 1339959 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vra2g0174 PLATZ 3.6e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0174 - - gmx:100810757 419.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0174 2 1337762 1339959 Vra11g0139 11 901399 903883 ECH
Vra2g0174 2 1337762 1339959 Vra2g0174 2 1337762 1339959 ECH