Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0164 ATGGCTCCTTCTGGCTGTGTTACTGATTCAATTCCTCCGTCAACAACGCTAGAAGTTGAAGAGAAGGATCTTCGGCCATTCTTTGTTCTTCATAAAGCTTCATCCCGGAAAAAAGATAGAACACCAACTGCACAGGCAAAGTTGTGCATGACGAATGAATTATCTTCATCACCAGAGAGTGTAAAAAAGTTGGGAGGAAGTATGACGGAGGGATGTGATCTCCATTTGTTTCAGCAACTACAAATTGAAGCTTTTGACATTGTTTGGGAAAAGATTGAATCTACCATTAAGGGTGTTTTAAGAGATCTCAATGCCAATGTATTTAATAATATACAACAATGGGTTCTGGAGTGCTTCAACACTACTAAGTTGCTTGGACAACATACCATTGCTGAAGCAACTCGGTCTTTTCCTGTTCTAAATAATACCACTCCTGGGCAGCTGTTCACTGCTTTTATTGTCACCAGAAACATAGAGTTCGTTGATGATATGTTGACATTTGAAGAGCTTGGCCATTTCTTGAAATCCCATGGATGCCATGTGGCTAAGCTTTCATCCCTAGAGTTTTCATTGAAAAATGGGATTGCTGGTTGCTTGAAAGCTCTGTTGCGAGAGTTTGTTGGATGTGTTATTGATTCAGCTGATATATCAATCTTAGCATCATGGTATAGAGAACATGTAAACTACAATAAACCACTGGTGCTGATCATTAATGATTTGGGGAGATGTTCTGGATCAGTCTTAACTGATTTTATCTTGATGCTGAGTGAATGGATTGTCAAGGTGCCAATTATCTTCATATTTGGAGTTGCAACGACAGTGGATACCCCGAGAAACATTCTGCCATCACATGCTCTTGAGCGTTTGTGTCCCTCTAGTTTTATGCTTGGAACACCTGCCGAGAGAATGGATGCAATTGTTGAGGCTGTTCTTGTGAAACATTGTACCATGTTCAGTATTGGTCATAAAGTGGCCGTCTTCCTAAGGAACTACTTCATCAACCAGGATGGGACAATAACATCCTTTATTAGAGCTTTGAAGGTAGCTTGCCTATTGCATTTCTCAATGGAACCTCTAAGTCTCATACATGGGCGAGCACTGGCTGAAGATCAGAAGGAGGGTAAATCTGCAGTATCACCTGAGACACTGCTGAAATACATAGATCAACTTCCATTGTATGCAAGGAGTCAAATCGCTGATCATCACACTAAAAAGAGCACGGCTGAGGGTTTGTCAGAATTGGTGACAATGCAGAAACTATGGAGTACTGCAGTTCTGTGCCTATATGAAGCTGGAAAATATAGCAGAGTGCGACTATTGGATTTGTTTTGTGAAGCTCTAAGTCAAGATTTGTACCTGTCACGGGGTCCTGATTGTCATGTGGGAAATGAAAGATATTGTGGTTTGTCTTCCACAAATGATTCCAGTCAACAATATTCCATCATGCAAAGCGGTGGTTATATTGGCCAGATAGTACGAAATGTGAGGGATCTCCCCGCAGGGATGCTATATCAGTTAATTGAGAATTGGGAAAAACTTACTGCAGATATTTCAGAGATTCACGAGAAACTGAAAGTGTTGCAATCTTCATTAAGATGTGAAGATGGAAAGAGTCCACGCAAGAGTTCCAAGGACAATCCCAAGAGATATACGTCCAAGATTTCAGTAAACACTGATAAGGATGCAAGAATGCTAAATTCACAAGCTATTGCATTTTTAAACTGTCTAGTTGGGAATTTTTTGAAGCCCATTGAAGGCATGCCTTTCCACGAAATTTTATGTTTCAAGAATGTTGAGAAGCTTCAATTGGTTTTAATTGGAGATCCAAGAAGAAGAATTCAGGTTGATCTGTTGGAGTTCCATAAGATTTTAAGGTGTAGCTGCTGTAGCAAGAATGGCAATGCTCTATTGCCATCCAGGCATGATTCCTCAATTATGTATTCTCTGGCTCAAGAGCATGGAGATCTTATCAATCTCCATGACTGGTTTCAGTCTTTTAGATCAATTGTTCTTCAAAATAAAAATAAACGGAAGCAAAATACAAAGCAATCCCCACAACCAAAGAAGAGAAAAGCTATAAATGGATCTGCAGACCAAAACGAAGCGTCAATTCAAGCACGCTTTTGCAAGGCAGTTACAGAGCTGCAGATCACAGGACTGGTTAGAATGCCCAGCAAGAGACGCCCAGATTTTGCGCAAAGAATAGCATTTGGACTTTGA 2220 0.4036 MAPSGCVTDSIPPSTTLEVEEKDLRPFFVLHKASSRKKDRTPTAQAKLCMTNELSSSPESVKKLGGSMTEGCDLHLFQQLQIEAFDIVWEKIESTIKGVLRDLNANVFNNIQQWVLECFNTTKLLGQHTIAEATRSFPVLNNTTPGQLFTAFIVTRNIEFVDDMLTFEELGHFLKSHGCHVAKLSSLEFSLKNGIAGCLKALLREFVGCVIDSADISILASWYREHVNYNKPLVLIINDLGRCSGSVLTDFILMLSEWIVKVPIIFIFGVATTVDTPRNILPSHALERLCPSSFMLGTPAERMDAIVEAVLVKHCTMFSIGHKVAVFLRNYFINQDGTITSFIRALKVACLLHFSMEPLSLIHGRALAEDQKEGKSAVSPETLLKYIDQLPLYARSQIADHHTKKSTAEGLSELVTMQKLWSTAVLCLYEAGKYSRVRLLDLFCEALSQDLYLSRGPDCHVGNERYCGLSSTNDSSQQYSIMQSGGYIGQIVRNVRDLPAGMLYQLIENWEKLTADISEIHEKLKVLQSSLRCEDGKSPRKSSKDNPKRYTSKISVNTDKDARMLNSQAIAFLNCLVGNFLKPIEGMPFHEILCFKNVEKLQLVLIGDPRRRIQVDLLEFHKILRCSCCSKNGNALLPSRHDSSIMYSLAQEHGDLINLHDWFQSFRSIVLQNKNKRKQNTKQSPQPKKRKAINGSADQNEASIQARFCKAVTELQITGLVRMPSKRRPDFAQRIAFGL* 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0164 739 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 225 361 IPR045667 -
Vra2g0164 739 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 78 207 IPR045667 -
Vra2g0164 739 MobiDBLite consensus disorder prediction 674 699 - -
Vra2g0164 739 Pfam Origin recognition complex winged helix C-terminal 610 737 IPR040855 -
Vra2g0164 739 MobiDBLite consensus disorder prediction 674 690 - -
Vra2g0164 739 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 32 738 IPR020795 GO:0003677|GO:0005664|GO:0006260
Vra2g0164 739 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 32 738 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0164 1 671 Core DNA Replication Machinery Family AT5G16690 45.468 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0164 K02605 - gmx:100780646 1244.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0164 2 1254397 1263864 Vra2g0164 2 1254397 1263864 ECH