LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vra2g0154	ATGTACTCATTCTCATACATGGAAACGTGGTACATTGTCTCTGTTCTGTGTTTTTCCCTTTGGCTGATTCTCAAATCCACATGCAAAGTTCTCTTTCCTCCACTCCCTCCGGGACCTTCCAAATGCAATTTTGCATTGCTTCAAGGATACTTCACTGACCCCAAAACCATTCTTCAAAAACTCGTTGCAAAATATGGTCCAATCTTCTCTGTTCATGTTGGTTATTCTCACACTGATATTTTCATCGCAAGTCGTTTCCTTGCACACCAAGCTTTGATCCAACATGGCACCATCTTCGCTGATCGCCCCAAGGCTAACCCCACCAACAAGGTTATAAGTAGCAACCAACATGACATTCTTTTCAGCTTCTATGGCCCCAGATGGCGCCTCCTTAGGCGCAACCTCACTTCAAGAATCCTTCACCCTTTGCAGGTTAAGTCCTATGCACACGCACGCAAATGGGTCCTAGCGATGATCCTACAAGGCCTCATATCTGATTCTGAGGGTAACAGCCCCGTAAGGGTCATTGACCACTTTCAACATGGCATGTTTTCTTTGATGGTTTTGATGTGCTTTGGTGACAAACTCGATGAGAAGCAAATAAGGGAAATTGAGAACAGTCAACGTGACATGCTTGTGAGTTATGATAGGTACAGTATCTTGAACTTTTGGCCAACAGTTACTAGGATTTTGTTCTGGAAGAGGTGGAAGGAGTTCTTGCAGAAGCGGAGAGACCAAGATGCTGTGTTGATTCCTCACATCAATGCTCGAAGGAAGGCTAAGGAAGAGAGAGTGAGGAATGGCTCAAGTCAGTCGAGTGATTCTGCATTGTCATATGTGGACAGTTTGTTGGATTTGCCAATGTTGGAGGATGAGAAGGGGATACATCTTGATGATGGTAAAATTTGCACCTTATGTTCGGAGTTTCTGAATGCTGGATCAGATACAACTTCAACTGCATTGGAGTGGATCATGGCAAATCTGGTGAAATGCCCCAAAATCCAAGAAAGTGTAGTGGGGGAAATTAGAAGGGTGATGGTTGGTAGAGAGGATAGGGAAGTGAAGGAGGAGGATTTGCACAAATTGCCTTATCTCAAGGCTGTGATTTTGGAGGAGTTGAGGCGTCACCCTCCGTTACACTTTGTGGCTCCTCACAGAGTAACTAAAGATGTTGTTTTAAATGGTTATTTGGTGCCTACCTATGCCTCAGTGAATTTCTTGGTGGCAGAGATAGGAAGGGACCCTACAGCTTGGGATGACCCCATGGCCTTTAAGCCAGAGAGGTTCATGAACATTGGGGACCAGAATGGAGGCACAACTTTTGACATAATGGGAAGTAAAGAGATAAAGATGATGCCGTTTGGGGCAGGAAGGAGAATGTGTCCTGGCTATGCTTTGGCAATGTTGCACTTGGAGTACTTTGTGGCCAATTTTCTTTGGAATTTTGAGTGGAAGGTTGTGGATGGAGAGCATGTCGATCTTTCAGAGGAGCTGCAATTCACAACTGTAATGAAGAATCCTTTGAAGGTTCATATATTACCCAGGCAATAG	1551	0.4449	MYSFSYMETWYIVSVLCFSLWLILKSTCKVLFPPLPPGPSKCNFALLQGYFTDPKTILQKLVAKYGPIFSVHVGYSHTDIFIASRFLAHQALIQHGTIFADRPKANPTNKVISSNQHDILFSFYGPRWRLLRRNLTSRILHPLQVKSYAHARKWVLAMILQGLISDSEGNSPVRVIDHFQHGMFSLMVLMCFGDKLDEKQIREIENSQRDMLVSYDRYSILNFWPTVTRILFWKRWKEFLQKRRDQDAVLIPHINARRKAKEERVRNGSSQSSDSALSYVDSLLDLPMLEDEKGIHLDDGKICTLCSEFLNAGSDTTSTALEWIMANLVKCPKIQESVVGEIRRVMVGREDREVKEEDLHKLPYLKAVILEELRRHPPLHFVAPHRVTKDVVLNGYLVPTYASVNFLVAEIGRDPTAWDDPMAFKPERFMNIGDQNGGTTFDIMGSKEIKMMPFGAGRRMCPGYALAMLHLEYFVANFLWNFEWKVVDGEHVDLSEELQFTTVMKNPLKVHILPRQ*	517

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Vra2g0154	516	PANTHER	FLAVONOID 3'-MONOOXYGENASE-RELATED	16	513	-	-
Vra2g0154	516	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	454	463	IPR017972	GO:0005506\|GO:0016705
Vra2g0154	516	PRINTS	P450 superfamily signature	312	329	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Vra2g0154	516	PRINTS	P450 superfamily signature	367	378	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Vra2g0154	516	PRINTS	P450 superfamily signature	452	461	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Vra2g0154	516	PRINTS	P450 superfamily signature	461	472	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Vra2g0154	516	Gene3D	Cytochrome P450	30	516	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Vra2g0154	516	SUPERFAMILY	Cytochrome P450	32	515	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Vra2g0154	516	Pfam	Cytochrome P450	34	508	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Vra2g0154	516	PANTHER	CYTOCHROME P450	16	513	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Vra2g0154	Vra-Chr2	1197555	1199491	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vra2g0154	7	516	Cytochrome P450	AT1G64940	51.440	1.38e-180	515

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vra2g0154	K24184		-	gmx:100816275	878.626

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vra2g0154	2	1197555	1199491	Vra2g0154	2	1197555	1199491	ECH

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