Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0154 ATGTACTCATTCTCATACATGGAAACGTGGTACATTGTCTCTGTTCTGTGTTTTTCCCTTTGGCTGATTCTCAAATCCACATGCAAAGTTCTCTTTCCTCCACTCCCTCCGGGACCTTCCAAATGCAATTTTGCATTGCTTCAAGGATACTTCACTGACCCCAAAACCATTCTTCAAAAACTCGTTGCAAAATATGGTCCAATCTTCTCTGTTCATGTTGGTTATTCTCACACTGATATTTTCATCGCAAGTCGTTTCCTTGCACACCAAGCTTTGATCCAACATGGCACCATCTTCGCTGATCGCCCCAAGGCTAACCCCACCAACAAGGTTATAAGTAGCAACCAACATGACATTCTTTTCAGCTTCTATGGCCCCAGATGGCGCCTCCTTAGGCGCAACCTCACTTCAAGAATCCTTCACCCTTTGCAGGTTAAGTCCTATGCACACGCACGCAAATGGGTCCTAGCGATGATCCTACAAGGCCTCATATCTGATTCTGAGGGTAACAGCCCCGTAAGGGTCATTGACCACTTTCAACATGGCATGTTTTCTTTGATGGTTTTGATGTGCTTTGGTGACAAACTCGATGAGAAGCAAATAAGGGAAATTGAGAACAGTCAACGTGACATGCTTGTGAGTTATGATAGGTACAGTATCTTGAACTTTTGGCCAACAGTTACTAGGATTTTGTTCTGGAAGAGGTGGAAGGAGTTCTTGCAGAAGCGGAGAGACCAAGATGCTGTGTTGATTCCTCACATCAATGCTCGAAGGAAGGCTAAGGAAGAGAGAGTGAGGAATGGCTCAAGTCAGTCGAGTGATTCTGCATTGTCATATGTGGACAGTTTGTTGGATTTGCCAATGTTGGAGGATGAGAAGGGGATACATCTTGATGATGGTAAAATTTGCACCTTATGTTCGGAGTTTCTGAATGCTGGATCAGATACAACTTCAACTGCATTGGAGTGGATCATGGCAAATCTGGTGAAATGCCCCAAAATCCAAGAAAGTGTAGTGGGGGAAATTAGAAGGGTGATGGTTGGTAGAGAGGATAGGGAAGTGAAGGAGGAGGATTTGCACAAATTGCCTTATCTCAAGGCTGTGATTTTGGAGGAGTTGAGGCGTCACCCTCCGTTACACTTTGTGGCTCCTCACAGAGTAACTAAAGATGTTGTTTTAAATGGTTATTTGGTGCCTACCTATGCCTCAGTGAATTTCTTGGTGGCAGAGATAGGAAGGGACCCTACAGCTTGGGATGACCCCATGGCCTTTAAGCCAGAGAGGTTCATGAACATTGGGGACCAGAATGGAGGCACAACTTTTGACATAATGGGAAGTAAAGAGATAAAGATGATGCCGTTTGGGGCAGGAAGGAGAATGTGTCCTGGCTATGCTTTGGCAATGTTGCACTTGGAGTACTTTGTGGCCAATTTTCTTTGGAATTTTGAGTGGAAGGTTGTGGATGGAGAGCATGTCGATCTTTCAGAGGAGCTGCAATTCACAACTGTAATGAAGAATCCTTTGAAGGTTCATATATTACCCAGGCAATAG 1551 0.4449 MYSFSYMETWYIVSVLCFSLWLILKSTCKVLFPPLPPGPSKCNFALLQGYFTDPKTILQKLVAKYGPIFSVHVGYSHTDIFIASRFLAHQALIQHGTIFADRPKANPTNKVISSNQHDILFSFYGPRWRLLRRNLTSRILHPLQVKSYAHARKWVLAMILQGLISDSEGNSPVRVIDHFQHGMFSLMVLMCFGDKLDEKQIREIENSQRDMLVSYDRYSILNFWPTVTRILFWKRWKEFLQKRRDQDAVLIPHINARRKAKEERVRNGSSQSSDSALSYVDSLLDLPMLEDEKGIHLDDGKICTLCSEFLNAGSDTTSTALEWIMANLVKCPKIQESVVGEIRRVMVGREDREVKEEDLHKLPYLKAVILEELRRHPPLHFVAPHRVTKDVVLNGYLVPTYASVNFLVAEIGRDPTAWDDPMAFKPERFMNIGDQNGGTTFDIMGSKEIKMMPFGAGRRMCPGYALAMLHLEYFVANFLWNFEWKVVDGEHVDLSEELQFTTVMKNPLKVHILPRQ* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0154 516 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 16 513 - -
Vra2g0154 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
Vra2g0154 516 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g0154 516 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g0154 516 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g0154 516 PRINTS P450 superfamily signature 461 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g0154 516 Gene3D Cytochrome P450 30 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g0154 516 SUPERFAMILY Cytochrome P450 32 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g0154 516 Pfam Cytochrome P450 34 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g0154 516 PANTHER CYTOCHROME P450 16 513 - -
Vra2g0154 516 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g0154 516 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g0154 516 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g0154 516 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g0154 516 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g0154 516 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g0154 516 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g0154 516 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0154 Vra-Chr2 1197555 1199491 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0154 7 516 Cytochrome P450 AT1G64940 51.440 1.38e-180 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0154 K24184 - gmx:100816275 878.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0154 2 1197555 1199491 Vra2g0154 2 1197555 1199491 ECH