Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0137 ATGGAAGAGAGTGTAGTAACCTTTGTATTAGATCATTTAGCCCAGCTTGTGGCACGCGAAGCTAACTTGCTGTATGGCGTGGAAGACAGGGTCCAGTCCCTCCAGAACGAACTTCAAATGATCAAAGAGCTCCTCAATACCACAAAGAGAAAGAAGGGAATGGAACATACTGTACTGAACCAAATCAGAGATGTGGCCCACTTAGCTGAGGATGTCATCGATACATTCGTAGCCAAAGTTGCCATTTACAAGAGAAGAACCATTCTGGGGAAGATGCTCCGTGGCTTTGGCCAATTAAGGTTGCTCCACCACGTAGCCGATAAAATAGACACGATCAAAGCCACTCTCAACGAAATACGCGACAACAAGGACAAATATGACGCTTTCAAAGAAACCAATAATCAATCTGCAGCAGAAGAGGCGGAGGAGGAGAAAAGGGCGCAATCACTGCACAAGCTAAGAAGAAATGTGGAGGAAGAAGATGTAGTTGGCTTTATCCATGACTCCAAGGATGTCATCAACCTACTCCTGGAAGGAGGTTCAAATCGTAAAGCTGTCTCTATCGTTGGCATGGGGGGATTGGGAAAGACCACCCTTGCCCGAAAGGTCTATAATAGCAGCCAGGTGATGAACCACTTCGATTGTCGCGCGTGGGTTTATGTCTCAAACGAGTGCAGAGTTAAGGATCTTTTGATTGGCCTTTTTAAGCATTTGATGCCAAATTTTGAACAGCAACAACGTAGAGGCAACAAAAGAGGTAAGAAAAGCGCAGGAGAAATTAACGACCTTAGTGAGGAGGAACTGAAGAAATTGGTGCGAAACTGCTTGGAGTGGAAAAGGTATCTTGTGGTGGTAGATGACTTGTGGAAAAAGCAAGATTGGGACGAGGTGCTAGATGCTTTTCCAGACAACAACAAAGGCAGCAGAATATTGATCACTAGTCGTTTGAAAGAGGTGGCCTTGCATGCTGGCCATGATGTTCCTCACTATCTTCAATTCCTGAATGAAGAAGAAAGTTGGGAGTTGTTTCGCAGGAAAGTGTTTAGGGGTGAAGACTACCCTTCTGATTTGGAGCCTTTGGGAAAGCAGATGGTTCGAAGTTGTCGTGGTTTGCCGCTCTCCATCATTGTCTTAGCAGGGCTGCTAGCCAACAAGGAAAAGTCACATAGAGAATGGTCTAAAGTGGTGGGTCATGTTAATTGGTATCTCACTCAAGACGAGACCCAAGTGAAGGATATAGTTCTGAAACTCAGCTATGACAATTTGCCAAAGAGATTAAAACCGTGTTTTCTCTATCTTGGGTTATTTCCAGAAGACTTTGAAATACCTGTCACACCATTATTGCAAAAATGGGTTGCAGAGGGTTTTATACAAAATACAGGAAACAGAGACCCAGACGATGTTGCGGAAGACTACTTATATGAGCTCATTGATCGTAGTTTGGTCCAGGTAGTAAGAGTAGAGACTAATGCAGGTGTGGAGACATGTCAGATTCATGATCTTCTTCGAGATCTTTGCATATTAGAAAGCAAAGAGGACAAAGTTTTTGAAGTTTTCACAGACCATAGTATTCTAATTTCAGCAAAACCACGCAGGCTTTCAATTCACGGTAAGATGGATCACTACATTTCTTTAAGCAATAATGATCATTCATGTGTTCGTTCCGTGTTCTTCTTTGGCTCACATTACTATATTCGTGGGAGGGACTGGAAATGGATTTTTGAAAACTTGAAATTGGTTCGAGTATTGGAGTTTGGACTAAACGGCTCTAACAAGATCCCTTCCAATTTAGGGAATTTTATCCATTTAAAGTATCTGAGAATACACATAGAGTATGTTATGTTTGTTCCAGATTCAATTCTTAAGCTTTGGAATTTACAAACCATAGACCTAAGTCCTCCGAGGGCTAACGTTCCAATTTCTTTCCCTGCCCAAATATGGAAACTGAGACATTTAAGGCATTTAAATACACCACGACCTATCAAGCTGCGAGGCAGTTGTTCAGGATCATATGAGAAGATGTGGAATGCTCAAACTATCTCTTCCTTGCTACTCAATAGCCAAGCAATGTCTTTGATAAAAAGAGGAACATTCCCTAATGTTAAGAGGTTAGGGTTGAGAGTGACTTCAGAATGTGAAGCTGAATTACCCAAATTGTTGCAGAGCTTACATCAATCAAGTTATTTGAACAAGTTAGTAATTGTCCTCCGAGATAGAGATGATGAAGGTGTAAAGGACTTGACCGATGAGAGTGTGAAAAGGAACAATGGTTTCAAGCCGCAAGAAGTGTTACAGAGCTTAGGACAATTCAATTGTCTAACTATTTTAACCATTAAGAATGCTTTCGACCTTTTAACCTGTGAACTCACATTCCCTCCAACTGTTACAGAATTAACGTTGTCAGAGATTGACTGCATTAGTGATGAGGGGATAAATGGTTTGGGAAATCACACCAAACTAAAAAAATTGAGACTTTTGGGAGATGTATCCTTGTCGACGGGGGAATCCTTTGACTTGAATTGTGTCGGAGGCGGCTTCTCGCAATTGGAAGTGATTGAAATGGAAAATTTGAACCTTGAAAAGTGGAAACTAGACAATGGTGCAATGTCGAGACTTCAGAGTGTGATGATTCACAATTGTGAAAGGTTAGATGATCTTCCAAATGAACTTTGGTCATTGAGTGGCTTGAGAAAAGTGCAGGTAATGAAACCTTCAAAAGAAATGGCTCGCATGCTAAGGAATTTGGAAATAAAGAATGGGGTTCAACTCGTCACAGAGGATTATCAGCCTCGATTTCAATGTCGGTTGAATAGTATTGATTCGATGGATTTCAATACTTTTGAATATATTAGTGACATCTAA 2862 0.413 MEESVVTFVLDHLAQLVAREANLLYGVEDRVQSLQNELQMIKELLNTTKRKKGMEHTVLNQIRDVAHLAEDVIDTFVAKVAIYKRRTILGKMLRGFGQLRLLHHVADKIDTIKATLNEIRDNKDKYDAFKETNNQSAAEEAEEEKRAQSLHKLRRNVEEEDVVGFIHDSKDVINLLLEGGSNRKAVSIVGMGGLGKTTLARKVYNSSQVMNHFDCRAWVYVSNECRVKDLLIGLFKHLMPNFEQQQRRGNKRGKKSAGEINDLSEEELKKLVRNCLEWKRYLVVVDDLWKKQDWDEVLDAFPDNNKGSRILITSRLKEVALHAGHDVPHYLQFLNEEESWELFRRKVFRGEDYPSDLEPLGKQMVRSCRGLPLSIIVLAGLLANKEKSHREWSKVVGHVNWYLTQDETQVKDIVLKLSYDNLPKRLKPCFLYLGLFPEDFEIPVTPLLQKWVAEGFIQNTGNRDPDDVAEDYLYELIDRSLVQVVRVETNAGVETCQIHDLLRDLCILESKEDKVFEVFTDHSILISAKPRRLSIHGKMDHYISLSNNDHSCVRSVFFFGSHYYIRGRDWKWIFENLKLVRVLEFGLNGSNKIPSNLGNFIHLKYLRIHIEYVMFVPDSILKLWNLQTIDLSPPRANVPISFPAQIWKLRHLRHLNTPRPIKLRGSCSGSYEKMWNAQTISSLLLNSQAMSLIKRGTFPNVKRLGLRVTSECEAELPKLLQSLHQSSYLNKLVIVLRDRDDEGVKDLTDESVKRNNGFKPQEVLQSLGQFNCLTILTIKNAFDLLTCELTFPPTVTELTLSEIDCISDEGINGLGNHTKLKKLRLLGDVSLSTGESFDLNCVGGGFSQLEVIEMENLNLEKWKLDNGAMSRLQSVMIHNCERLDDLPNELWSLSGLRKVQVMKPSKEMARMLRNLEIKNGVQLVTEDYQPRFQCRLNSIDSMDFNTFEYISDI* 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0137 953 Pfam NB-ARC domain 171 421 IPR002182 GO:0043531
Vra2g0137 953 Pfam Rx N-terminal domain 5 81 IPR041118 -
Vra2g0137 953 SUPERFAMILY L domain-like 498 901 - -
Vra2g0137 953 CDD RX-CC_like 3 121 IPR038005 -
Vra2g0137 953 PANTHER - 43 925 - -
Vra2g0137 953 Coils Coil 24 51 - -
Vra2g0137 953 Gene3D - 144 327 IPR027417 -
Vra2g0137 953 PANTHER DISEASE RESISTANCE PROTEIN RP 43 925 IPR044974 GO:0006952
Vra2g0137 953 Gene3D Ribonuclease Inhibitor 547 930 IPR032675 -
Vra2g0137 953 Gene3D - 5 106 - -
Vra2g0137 953 Gene3D - 419 508 IPR036388 -
Vra2g0137 953 Gene3D - 333 418 IPR042197 -
Vra2g0137 953 PRINTS Disease resistance protein signature 185 200 - -
Vra2g0137 953 PRINTS Disease resistance protein signature 275 289 - -
Vra2g0137 953 PRINTS Disease resistance protein signature 368 382 - -
Vra2g0137 953 PRINTS Disease resistance protein signature 621 637 - -
Vra2g0137 953 Coils Coil 140 160 - -
Vra2g0137 953 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 433 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0137 Vra-Chr2 1075181 1078120 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0137 184 436 WRKY Transcription Factor Family AT5G45050 26.562 2.98e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0137 - - vra:106779070 1286.17