Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0135 ATGGAAGAGAGTATAGTTTCCTTTGCTTTAGATCACTTAGCCCAGCTTGTGGCAGACGAAGTTAACTTGCTGTATGGCGTGAAGGATAGAGTCCAGTCCCTCCAGAGAGAACTTGAAATGATCAAAGAGCTCCTCAATAACACAAGGAGAGAGGAGGGAATGGAACATATAGTACTGAACCAAATCAGAGATATGGCCTACTTAGCTGAGGATGTCATCGACACATTCGTAGTCGAAGTTGACATTTACAAGAGGAAAACCATTTTGCAGAAGATGCTCTGTTGCTTTGGCCAAGTAAGGTTGCTCCACCGCTTATCCGCCAAAATTGACTATATCAAAACCACTCTCAAGGAGATACGCGACAACAAGGACATATATGATGCTTTCAGAGAAACCACTAATGAATCCGCAGCAGAAGAGAAGAGGGAAAGGCTGGAATGGCTGCAGAGGCTAAGAAGAGACGTGGAGGTAAAAGATGTGGTTGGCTTTGTCCGTGACTCCGAGGTTGTCGTCAACCAACTCTTGGGAGATAGTTCAAATCGTAAAGTCGTCTCTATCGTTGGCATGGGGGGATTGGGAAAGACCACCCTTGCCCGAAAGGTCTTTAATAAAAGCCAGGTGAAGAACCACTTCCATTGTCTTACGTGGGTTAATGTCTCGAACGACTGCAGAGTAAAGGAGCTTTTGCTTGGCCTTCTTAAACAGTTGATGCCAAATTTTGAACAACAATGCGGAGGCATTAACAACTGGAATGAGGATGAGCTAAAAAATAAGGTGGAGAACTGCTTGGAGGGGAAAAGGTATCTTGTGGTGCTAGATGACTTGTGGAATATAAGGGATTGGGACAAGGTGAAAAGTGCTTTTCCAGACAACAACAGAGGGAGCAGAATATTGATTACTAGCCGTTCGAAAGAGGTTGCCATGCATGCTGGTCTTGATGTTCCTCACTATCTTCCATTTCTCAAAGAAGAAGAAAGTTGGGAGTTGTTTCGCAAGAAAGTGTTTATCGATGGAGACTGCCCTTCTGATTTGGAGCCTCTGGGAAAGCTGATGGTTCAAAGATGTTGTGGTTTGCCGCTCTCCATCATTGTTTTGGCTGGGCTGTTGGCCAACAAGGAAAAGTCACATATACTATGGTCTGAAGTGGTCGATCATGTTAATTCATATATCAATCGAGATAAGACCCAAGTGAATGATATAGTTCTCAAGCTCAGCTATGACAATTTGCCAAGGAGACTAAAACCATGTTTTCTCTATCTTGGATTATTTCCTGAGGACTTTGAAATTCCTGTTGCGCCATTATTGCAAAAATGGGTTGCAGAGGGTTTTATACAAGATACAGGAGATAGAGACCCAGATAATGTTGCGGAAGACTACTTATACGAGCTCATCGATCGCAGTTTGGTCCAAGTAACAAGAGTGAAGTCAAATGGAAGTTTGGAGAAGTGTGAAGTTCATGATCTTCTTCGAGATCTGTGCATATCACAAAGCAAAAAGGAAAAAGTGTTTGAAGTTTGCACAAACAATAACATTGTAGGCATTGCCAAACCTCCCACACCTGACAAACCTCGCAGACTGTCCATTCACAGTGCCATGCATGACTACATTTCTGCAAGCAAAAGAGACCATTCATGTGTTCGTTCCCTATTTTTCTTTGGGACACATTATGATCAGTGGAAATGGCTTGTTGACGACTTCAAATTGGTTCGAGTGTTAGAGTTTGGACCTATCAGTCGTCAAGAGAACCTTTCCAATCTAGGGAACTTCATCCACTTAAGGTACTTAAGAATAAAAGATGTTTATGTTTACTTTGTTCCAGATTCAATACTTAATCTTTTGAATCTACAAACCATAGACCTGGGTATTTCCAGGGGCGGGGGTCGAGTTTCTTTTCCTATTCAAATATGGAAACTCAAATATTTAAGACATTGGAATTCATCTGGACCTATCGAGTTGCGAGGAAATTGTTCGCAATCAGTTAAGAAAATGTGGAATCTTCAAACCATGTCTCCCCTTGTATGCAATAAGCAAGCAATATCTCTAATAAAGAATAGAACATTCCCCAATATTAAGAGGATGGGATTGGACGGGAGTCGTGAATGTGGAGATGAATTACACAATTTATTGCATAACCTACAACAATTAGAGCATTTGAATTCATTAGTGATTATTCCCCAAGGTTTTCTTGATTTCAAGCCTCAAGAACTGGTTCAAGGGCTAGGAGAATTCAGTCATCTAACTATTTTAGAGATTCATTGTGTAAAGGATCTTCTAACCTCTGAGCACATATTTCCACCAAATGTTACAGAGTTAACTTTGTCAGGAATTCACTGCATTAGTGATGAGGGGATGAATGGTTTGGGAAATCACTCTAAACTCAAGATTTTAAGACTTTTGGGAAATTTACTCATGTTTAAGAACCCCACTGACCTAAATTGTGTTGGCTTCCCACAGCTGGAAGTGTTGAAAATGAAATTTTTGCGGCTTCAAAAGTGGGAATTAGACAATGGTGCAATGCGGAGGCTTCAACATGTGATTATCGACCGTTGTGGACCATTAGGTAATCTCCCAACTGAGCTTTGTTATTTGAATGGGTTGAAAAAAGTACATATAAATAGCTTTCCCTCAAAAGAAGTGATTGGACAAATGGCTGACATCTTACGAACGTTGGAAACAAATAATGGAGTTCAAGTCTTGGCCGGACATATATATATTCCACCTTGGGATGAAGAGAATGATTGGGTACATGATTACTAG 2757 0.4099 MEESIVSFALDHLAQLVADEVNLLYGVKDRVQSLQRELEMIKELLNNTRREEGMEHIVLNQIRDMAYLAEDVIDTFVVEVDIYKRKTILQKMLCCFGQVRLLHRLSAKIDYIKTTLKEIRDNKDIYDAFRETTNESAAEEKRERLEWLQRLRRDVEVKDVVGFVRDSEVVVNQLLGDSSNRKVVSIVGMGGLGKTTLARKVFNKSQVKNHFHCLTWVNVSNDCRVKELLLGLLKQLMPNFEQQCGGINNWNEDELKNKVENCLEGKRYLVVLDDLWNIRDWDKVKSAFPDNNRGSRILITSRSKEVAMHAGLDVPHYLPFLKEEESWELFRKKVFIDGDCPSDLEPLGKLMVQRCCGLPLSIIVLAGLLANKEKSHILWSEVVDHVNSYINRDKTQVNDIVLKLSYDNLPRRLKPCFLYLGLFPEDFEIPVAPLLQKWVAEGFIQDTGDRDPDNVAEDYLYELIDRSLVQVTRVKSNGSLEKCEVHDLLRDLCISQSKKEKVFEVCTNNNIVGIAKPPTPDKPRRLSIHSAMHDYISASKRDHSCVRSLFFFGTHYDQWKWLVDDFKLVRVLEFGPISRQENLSNLGNFIHLRYLRIKDVYVYFVPDSILNLLNLQTIDLGISRGGGRVSFPIQIWKLKYLRHWNSSGPIELRGNCSQSVKKMWNLQTMSPLVCNKQAISLIKNRTFPNIKRMGLDGSRECGDELHNLLHNLQQLEHLNSLVIIPQGFLDFKPQELVQGLGEFSHLTILEIHCVKDLLTSEHIFPPNVTELTLSGIHCISDEGMNGLGNHSKLKILRLLGNLLMFKNPTDLNCVGFPQLEVLKMKFLRLQKWELDNGAMRRLQHVIIDRCGPLGNLPTELCYLNGLKKVHINSFPSKEVIGQMADILRTLETNNGVQVLAGHIYIPPWDEENDWVHDY* 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0135 918 Pfam NB-ARC domain 168 408 IPR002182 GO:0043531
Vra2g0135 918 CDD RX-CC_like 3 121 IPR038005 -
Vra2g0135 918 Coils Coil 138 158 - -
Vra2g0135 918 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 420 IPR027417 -
Vra2g0135 918 Gene3D - 320 405 IPR042197 -
Vra2g0135 918 Gene3D Ribonuclease Inhibitor 529 895 IPR032675 -
Vra2g0135 918 Gene3D - 406 498 IPR036388 -
Vra2g0135 918 Coils Coil 31 51 - -
Vra2g0135 918 SUPERFAMILY L domain-like 485 878 - -
Vra2g0135 918 Pfam Rx N-terminal domain 5 81 IPR041118 -
Vra2g0135 918 Gene3D - 138 313 IPR027417 -
Vra2g0135 918 PRINTS Disease resistance protein signature 183 198 - -
Vra2g0135 918 PRINTS Disease resistance protein signature 262 276 - -
Vra2g0135 918 PRINTS Disease resistance protein signature 355 369 - -
Vra2g0135 918 PRINTS Disease resistance protein signature 610 626 - -
Vra2g0135 918 PANTHER - 47 872 - -
Vra2g0135 918 Gene3D - 5 107 - -
Vra2g0135 918 PANTHER DISEASE RESISTANCE PROTEIN RP 47 872 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0135 Vra-Chr2 1061909 1064992 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0135 182 423 WRKY Transcription Factor Family AT5G45050 24.793 6.18e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0135 - - vra:106779070 1126.69