Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0134 ATGTTCTTTTCTATGCGATCGATTGCAAGCTACACTCTCTATTGCTTTACTGATGCCTTAGTAAATCTCTCTTACTCTTCTTCCATCACCAACCACAAACCCTTCCAACCACAGATCCAAATCTACACGCTCGTCCATGCTGTAATGGAAGAGATTGTAGTTTCTTTTGTTTTAGATCACTTAGCCCAGCTTGTCGCACGTGAAGTTAACTTACTGTATGGCGTGGAGGATGGAGTTGAGTCCCTCCGGAGAGAACTTGAAATGATCAAAGAGCTCCTCAATACCACAAGGAGAGAGAGGGGAATGGAACATATAGTACTGAACCAAATCAGAGATATGGCCTACTTAGCTGAGGATGTCGTCGACACATTCGTAGCCAAAGTTTCCATTTACAAGAGGAGAACCATTCTGGGGAAGACGCTCCATGGCTTTGGCCAAGCATGGTTGCTCCACCGCTTATCCGACAAAATTGACTATATCAAAAACACTCTCAAGGAGATACGCGACAACAAGGATACATATGATGCTTTCAGAGAAACCACTAATGAATCAGCAGCAGAAGAGGAGAGGGAAAGGCTGGAATGGCTGCGGACTCTAAGAAGAGACGTGGAGGTAAAAGATGTGGTTGGCTTTGTCCATGACTCCGAGGTTGTCGTCAACCGACTCCTGGGAGATAGTTCAAAACTTAAAGTCATCTCTATCGTTGGCATGGGGGGATTGGGAAAGACCACCCTTGCCCGAAAGGTCTTTAATAACATCCAGGTGAAGAACCACTTTGATTGTCTCGCGTGGGTTTATGTTTCAAACGAGTGCAGATTTAGAGAGCTTTTGCTTGGCCTTCTTCACCAGTTTATGCCAAATTTTGAACAACAATGCAGAGACATCAACAGCCGGAATGAGGATGAGCTAAAAAATATGGCGAAGAACTGCTTGGAGGGGAAAAGGTATCTTGTGGTGGTAGATGACTTGTGGAATATAGAGGATTGGGATAAGGTGAAAGGTGCTTTTCCAGACAACAACAGAGGCAGCAGAATATTGATTACTAGTCGTTCGAAAGAGGTGGCCACGCACGCTAGTCTTGATGTTCCTTACTATCTTCCATTTCTCAATGAAGAAGAAAGTTGGGAGTTGTTTCGTAAGAAAGTGTTTATCGATGGAGACTGCCCTTCTGATTTGGAGCCTCTGGGAAAGCAGATGGTTCAAAGATGCTGTGGTTTGCCGCTCTCCATCATTGTTTTGGCTGGGTTGCTGGCCAACAAGGAAAAGTCACATACAATATGGTCTAAAGTGGTCGATCATGTTAATTCGTATATCAATCAAAATAAGACCCAAGTGAATGAGATAGTTCTCAAGCTGAGTTATGACAATTTGCCAAGGAGACTAAAACCATGTTTTCTCTATCTTGGGTTATTTCCTGAGGACTCTGAAATACTTGTTGAGCCATTATTGCAAAAATGGGTTGCAGAGGGTTTTATACAAGATACAGGAGATAGAGACCCAGATGATGTTGCGGAAGACTACTTGTACGAGCTCATCGATCGCAGTTTGGTCCAGGTAGCACGGGTGAAGTTAAATGGAAGTTTAGAGAAGTGTCAAATTCATGATCTTCTTCGAGATCTTTGCATATCGCAGAGCAAAAAGGACAAAGTGTTTGAAGTTTGCACAAACAATAACATTGTAGACTCTACCAAACCTCGCAAACTGTCCATTCAGAGTGCCACAAGTGACTACATTTCTTCAAGCAAAAGAGACCATTCATGTGTTCGTTCCCTGCTTCTCTTTGGGACACATGATGATGAGTGGAAATGGCTTGTGGACGAGTTCAAATTGGTTCGAGTATTACAGTTTGGATCTATCTATCTCCAAGCGATCCCTTCCATTCTAGGGAACTTCATCCACTTAAGGTACTTGAGAATAGAAAATGTTATTGTTTACTTTGTTCCAGATTCAATACTTAACCTTTGGAATCTACAAACCATAGACCTGGGTATTTTCAAATATAGGCAAGCAGTTTCTTTCCCTGCTCAAATGTGGAAACTTAAATATTTAAGACACTGGAATTCATCAGGGCCTATCGAGTTGCGAGGAAGATGTTTACAATCAGTTGAGAAGATGTGGAATCTTCGAACCATGTCTCCCCTTACACTCAATAAGCAAGCAATATCTCTAATAAGGAATGGAACATTCCCCAATATTAAGAGGATGGGGTTGAGCGGGAGTCATGATTGTGAAGATGAATTACCCAATTTATTGCAGTCCCTACAACAATTAGAACATTTGAATTCATTAGTGATTTTTCCCCAAGGTTTTTTTGATATCAATCCCCAAGAATTGGTTCAAAGGCTAGAACAATACAGTCATCTAACTACCTTAAGAATTGATTGGGTTAAGGATCTTCTAACCTCTGAGCTCATATTTCCCCCAAACATTATAGAGTTAACTTTGTCAAGGATTGAACACATTAGTGATGAAGGGATGAATGGTCTGGGAAATCACTCCAAACTCAAGATTTTAAGACTTTTGGGAAATCTAGATAGGTTTAATGATCCCATTGACCTCAATTGTGTCGGCTTCCCACAGTTGGAAGTGTTGAAAATGAAAGAATTGAAGCTTCGAAATTGGAAATTGGGCAATGGTGCAATGAGGAAGCTTCAACATGTGATTATTAAATTTTGTGGACCATATATTAATCTCCCAACTGAACTCTGTTCTTTGAATGGATTGAAACAAGTGCATATAGAAAGCAATATCGTACAAGTGACTGAACAGGTGCACGACATCTTACGAATATTGGAAACAGATAATAGAGTTCAAGTCTTTAGAAGCTTTTATCCAGCTTTGGATGAAGAGAATGATTGGGAATCTCATTATTAG 2874 0.4099 MFFSMRSIASYTLYCFTDALVNLSYSSSITNHKPFQPQIQIYTLVHAVMEEIVVSFVLDHLAQLVAREVNLLYGVEDGVESLRRELEMIKELLNTTRRERGMEHIVLNQIRDMAYLAEDVVDTFVAKVSIYKRRTILGKTLHGFGQAWLLHRLSDKIDYIKNTLKEIRDNKDTYDAFRETTNESAAEEERERLEWLRTLRRDVEVKDVVGFVHDSEVVVNRLLGDSSKLKVISIVGMGGLGKTTLARKVFNNIQVKNHFDCLAWVYVSNECRFRELLLGLLHQFMPNFEQQCRDINSRNEDELKNMAKNCLEGKRYLVVVDDLWNIEDWDKVKGAFPDNNRGSRILITSRSKEVATHASLDVPYYLPFLNEEESWELFRKKVFIDGDCPSDLEPLGKQMVQRCCGLPLSIIVLAGLLANKEKSHTIWSKVVDHVNSYINQNKTQVNEIVLKLSYDNLPRRLKPCFLYLGLFPEDSEILVEPLLQKWVAEGFIQDTGDRDPDDVAEDYLYELIDRSLVQVARVKLNGSLEKCQIHDLLRDLCISQSKKDKVFEVCTNNNIVDSTKPRKLSIQSATSDYISSSKRDHSCVRSLLLFGTHDDEWKWLVDEFKLVRVLQFGSIYLQAIPSILGNFIHLRYLRIENVIVYFVPDSILNLWNLQTIDLGIFKYRQAVSFPAQMWKLKYLRHWNSSGPIELRGRCLQSVEKMWNLRTMSPLTLNKQAISLIRNGTFPNIKRMGLSGSHDCEDELPNLLQSLQQLEHLNSLVIFPQGFFDINPQELVQRLEQYSHLTTLRIDWVKDLLTSELIFPPNIIELTLSRIEHISDEGMNGLGNHSKLKILRLLGNLDRFNDPIDLNCVGFPQLEVLKMKELKLRNWKLGNGAMRKLQHVIIKFCGPYINLPTELCSLNGLKQVHIESNIVQVTEQVHDILRILETDNRVQVFRSFYPALDEENDWESHY* 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0134 957 Gene3D - 454 545 IPR036388 -
Vra2g0134 957 PANTHER - 96 923 - -
Vra2g0134 957 Gene3D - 368 453 IPR042197 -
Vra2g0134 957 Coils Coil 150 170 - -
Vra2g0134 957 PANTHER DISEASE RESISTANCE PROTEIN RP 96 923 IPR044974 GO:0006952
Vra2g0134 957 SUPERFAMILY L domain-like 533 930 - -
Vra2g0134 957 Pfam Rx N-terminal domain 53 129 IPR041118 -
Vra2g0134 957 CDD RX-CC_like 51 169 IPR038005 -
Vra2g0134 957 Gene3D Ribonuclease Inhibitor 548 936 IPR032675 -
Vra2g0134 957 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 193 468 IPR027417 -
Vra2g0134 957 Coils Coil 79 99 - -
Vra2g0134 957 Gene3D - 53 146 - -
Vra2g0134 957 Pfam NB-ARC domain 216 456 IPR002182 GO:0043531
Vra2g0134 957 PRINTS Disease resistance protein signature 231 246 - -
Vra2g0134 957 PRINTS Disease resistance protein signature 310 324 - -
Vra2g0134 957 PRINTS Disease resistance protein signature 403 417 - -
Vra2g0134 957 Gene3D - 201 362 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0134 Vra-Chr2 1054009 1057053 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0134 229 540 WRKY Transcription Factor Family AT5G45050 23.567 5.81e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0134 - - vra:106779070 1146.72