Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0120 ATGATAAAACTACAACTCTTGAAAGTCTTTATATATTCTTTACAATTGGAGCCACTTTTAATATATACATTTGAATATTCTTTTCTATGCGATTGCAAGCTACACTCTATTGCTTTTTTCTGGTGCCTTAGTAAATCCCTGTTAGTCTTCTTCCATCACCAACCACGAACCATTATCCAACCACAGATCCAAATCTACACGCTCCTCCATGCTGTAATGGCAGACAGTGTAGTTTCCTTTGTTTTAGATCACTTAGCCCAGCTTGCCGCACGCGAAGCTAACTTGCTCTATGGCGTGGAGGACAGGGTCCAGTCCCTCCAGTACGAACTTCAAATGATCAAAGACCTCCTCAATACCACNAAGAGAAAGAAGGGAATGGAACATACTGTATTGGATCAAATCAGAGATGTGGCCCACTTAGCTGAGGATGTCATCGACACTTTCGTAGCCAAAGTTTCCGTTTACAAGAGGAGAACCATTCTCGGGAGGATGCTCCGTGGCTTTGGCCAAGTAAGGTTACTCCACCACGTAGCTGACAAAATAGACAAGCTCAAAACCACTCTCAACGAGATACGCGACAACAAGAACAAATATGATGCTTTCAAAGAAACCACTGATCAATCCGCAGTGGAAGAGGAGGAGAAGGAAAGGTTGCAATTGCTGCACGAGCTAAGAAGAGACGTGGAGGAAGAGAATGTAGTTGGCTTTGTCGACGACTCCAAGGATGTCGTCCAGCGACTCCTAAGAGGTGGTTCAAATCGTGAAGTTGTCTCTGTCGTTGGCATGGGGGGATTGGGGAAGACCACTCTTGCCCGAAAGGTCTATAATAGCAGCCAGGTGGTGAACCACTTCGATTGTCATGCATGGGTTTATGTCTCAAACGAGTGTAGAGTTCATGATCTTTTGATTGACCTTCTTAAGCATTTGATGCCAATTTTTGAACAACAACTTAGAGGCAACAAAAGCGCGGTAGACATTAAGGACCTTAGTAAGGAGGAACTGAAGAAACATGTGTGGAACTACTTGGAGAGGAAAAGGTATCTTGTGGTGGTAGATGACTTGTGGAAAAGGCGGGATTGGGATGAGGTGAAAGATGCATTTCCAGACAACAACAGAGGCAGCAGAATATTGATCACTAGTCGTTTGAAAGAGGTGGCCTTGCATGCTGGTGATGATGTTCCTCACCATCTTCAATTCCTTAGTGAAGAAGAAAGTTGGGAGTTGTTTTGCCGGAAAGCGTTTAGGGGTAAAAACTGCCCTTCTGATTTGGAGCCTCTAGGAAAGCAAATGGTTCAAAGTTGTCGTGGTTTGCCCCTCTCCATCATTGTCTTAGGAGGGTTGTTAGCCAACAAGGAGAAGTCAGATAGAGAATGGTCTAAAGTGGTAGGTCATGTTAATTGGTATCTCACTCGAGATGAGACCCAAGTGAAGGATATAGTTCTGAAACTCAGCTACGACAACTTGCCAAGGAGACTAAAACCATGTTTTCTCTATCTTGGGTTATTTCCTGAAGACTTTAAAATACCTGTTACGCCATTATTGCAAAAATGGGTTGCGGAGGGTTTTATACAAGATACAGGAAATAGAGACCCAGATGATGTTGCAGAAGACTACTTGTATGAGCTCATCGATCGCAGTTTGGTCCAGGTAGCAAGAATGGATTTTAATGGAGGTTTGAAGACATGTCAGGTTCATGATCTTCTTCGAGATCTTTGCATATCAGAGAGCAAAGAGGACAAAATGTTTGAAGTTTGCACAAACAATAACATTCTACTCCGTACCAAACCTCGTAGACTGTCCATTCACATCGACACAGGTCACTACATTTCTTCAAGCAATAATGACCATTCATGTATTCGTTCCCTGTTTTTCTTTGGGCCAGGTTATCATGTTCGTGGGAGAGAGTGGAAATGGCTTTTAGATGACTTTAAATTGGTTCGAGTGTTAGAGTTTGGACCTTACGACCGGAACAAGATCCCTTCCAACTTAGGGAACTTCATCCACTTAAGGTACTTGAGAATAAAAGATGTTTTTGTTTACTCTATTCCAGATTCGATACTTAACCTTTGGAATTTACAAACCATAGACCTGGGTAGTTGGGAGGGTCTCATGCCAGTTTCTTTCCCTATTCAAATGTGGAAACTCAAACATTTAAGGCATTTGAATACACAAGGGCCTATCAAGTTGCGAGGAAGATGTTCACCATCCTCATATGAGAAGATGTGGAATCTTCAAACCATCTCTCTTGTACTAAATATGCAAGCAACATCTCTAATAAAGAAAGGAACATTCCCCAATATTAAATGGTTGAGGTTGAAGGAGGAATATGGTTTCGTAGGTGAATTACCCAATTTATCACAGAACCTAGAATTAAATCATTTGAATAAACTACTGATTTTGTCCCCTTTTCGGCGTGGTCACAAGCTACAAGAACAGCTTCAAAGCCTAGGACAATTAAGTTGTTTAACTATCTTAATAATTACTGATGTTTTAGATCTTTTAACCTCCACGCTCATATTACCCCCAAACATTACAGAGTTAACATTGTCCGGGATTAAGTGCATTACTGATGAAGGGATGAATAGTCTCGCAAATCACTCCAAACTCAAAGTTTTGAGACTTCGAGGAAAAGTAACGGCGTTTGAGGATTCCGTTGACCTTAATTGTGCCGATGGGGGCTTCCCACAACTTGAAGTGTTTAAAATGAGAGATATAAAACTTCGAAAGTGGAGATTAGGCAATTGTGCAATGCAGAAGCTTCAAAATGTGTTTATCCTGGATTGTCGACCATTAGATCATCTCCCAACTGAACTTTGTTCTTTGAATGAATTGAGAGAAGTGCATATAACGGAATATCCCTCAAAACAAATGACTCACATCTTAGAAATTTTGAAAACAAATAATGGAGTTCGAGTCATTATAGGAATTTTTTCAACTCCAGATGTTGAGTGGAGTCATGTTAGTGGTGAGACGTATGAGATTTATTATTCAAAATAG 2997 0.4107 MIKLQLLKVFIYSLQLEPLLIYTFEYSFLCDCKLHSIAFFWCLSKSLLVFFHHQPRTIIQPQIQIYTLLHAVMADSVVSFVLDHLAQLAAREANLLYGVEDRVQSLQYELQMIKDLLNTTKRKKGMEHTVLDQIRDVAHLAEDVIDTFVAKVSVYKRRTILGRMLRGFGQVRLLHHVADKIDKLKTTLNEIRDNKNKYDAFKETTDQSAVEEEEKERLQLLHELRRDVEEENVVGFVDDSKDVVQRLLRGGSNREVVSVVGMGGLGKTTLARKVYNSSQVVNHFDCHAWVYVSNECRVHDLLIDLLKHLMPIFEQQLRGNKSAVDIKDLSKEELKKHVWNYLERKRYLVVVDDLWKRRDWDEVKDAFPDNNRGSRILITSRLKEVALHAGDDVPHHLQFLSEEESWELFCRKAFRGKNCPSDLEPLGKQMVQSCRGLPLSIIVLGGLLANKEKSDREWSKVVGHVNWYLTRDETQVKDIVLKLSYDNLPRRLKPCFLYLGLFPEDFKIPVTPLLQKWVAEGFIQDTGNRDPDDVAEDYLYELIDRSLVQVARMDFNGGLKTCQVHDLLRDLCISESKEDKMFEVCTNNNILLRTKPRRLSIHIDTGHYISSSNNDHSCIRSLFFFGPGYHVRGREWKWLLDDFKLVRVLEFGPYDRNKIPSNLGNFIHLRYLRIKDVFVYSIPDSILNLWNLQTIDLGSWEGLMPVSFPIQMWKLKHLRHLNTQGPIKLRGRCSPSSYEKMWNLQTISLVLNMQATSLIKKGTFPNIKWLRLKEEYGFVGELPNLSQNLELNHLNKLLILSPFRRGHKLQEQLQSLGQLSCLTILIITDVLDLLTSTLILPPNITELTLSGIKCITDEGMNSLANHSKLKVLRLRGKVTAFEDSVDLNCADGGFPQLEVFKMRDIKLRKWRLGNCAMQKLQNVFILDCRPLDHLPTELCSLNELREVHITEYPSKQMTHILEILKTNNGVRVIIGIFSTPDVEWSHVSGETYEIYYSK* 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0120 998 Gene3D - 485 575 IPR036388 -
Vra2g0120 998 PANTHER DISEASE RESISTANCE PROTEIN RP 117 952 IPR044974 GO:0006952
Vra2g0120 998 CDD RX-CC_like 74 193 IPR038005 -
Vra2g0120 998 Coils Coil 174 194 - -
Vra2g0120 998 Pfam NB-ARC domain 241 487 IPR002182 GO:0043531
Vra2g0120 998 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 218 499 IPR027417 -
Vra2g0120 998 SUPERFAMILY L domain-like 563 956 - -
Vra2g0120 998 Gene3D - 210 393 IPR027417 -
Vra2g0120 998 Gene3D - 399 484 IPR042197 -
Vra2g0120 998 Pfam Rx N-terminal domain 77 153 IPR041118 -
Vra2g0120 998 PRINTS Disease resistance protein signature 256 271 - -
Vra2g0120 998 PRINTS Disease resistance protein signature 341 355 - -
Vra2g0120 998 PRINTS Disease resistance protein signature 434 448 - -
Vra2g0120 998 PRINTS Disease resistance protein signature 687 703 - -
Vra2g0120 998 PANTHER - 117 952 - -
Vra2g0120 998 Gene3D Ribonuclease Inhibitor 611 972 IPR032675 -
Vra2g0120 998 Coils Coil 210 231 - -
Vra2g0120 998 Gene3D - 77 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0120 Vra-Chr2 931534 934768 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0120 257 824 WRKY Transcription Factor Family AT5G45050 23.529 3.47e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0120 - - vra:106779070 1976.83