Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0097 ATGGCAATAGCGTTCACCCAATGTTCAGAAAAGCTAGGGTACCTCATTCTTCAGTTAGCAAAAAATTTCATGGTGTATATGGCCATGGTGCTTGCATGCAACGGTTTACATTTCCTTCTAAAGCCCTATTCACAACCTCGCATTACTTCTGACATAGTTGTAGGAGTGGTATTGGGGAACATACCTTTTTTACGAAAACTGTTCGATGAATTCAACAGAGCCTTTGGATTTATCATGGATTTTGGGATGATGTGTTACATGTTTGCATTGGGTATAGAGATGGATCCCAGCCTACTGTTCAAACGCCCGAACAAGGATGCTCTGGTTGCATACACGGCGATACTCTGCACCTTCGCGGTATCCCTTTCATTGCTCCCATTTCTCCATTTCTTCTCACGGCTTACTGGCGTAGCCTTCACCATCTCCGTCTCTGCTCTTCTAGCGAGCTCAGCATCTCCAGTTCTCACGCGATTACTAACAAATATGAAGATAGGAAAATCAGACATTGGAAAGCTTGTGATAGCAGCAGGAATGCACTCGGATTTAGTCTGCTTGTTGATTTTCTCAATTTGCTACATTTTCATGCCAACCGATGCATACTGCATTGGGCACCACAGTGAAAGGACGCTGAAGAACGACATACAAACGATAATTGCGGTGGTGGTGCAGACGACGTTCACGGCGATGGTTTCGCCGGTTTTCATGGCATGGGTGAACAATGAGAACCCTGAAGGCAGACCCATGAAAGGGTCGCATCTGGTATTGTCGGTTGCCTTCATGGTCTTGATTTGCTCCCCCTCGACTCTATACGACTTTAGTCCGGTTCTAAGTGCGTTTATGACAGGGATATGTCTTCCCCGTGATGGAAGAGTTTCGAAATGGATTATCAGCAAAATCAACTACATCTTGTCCACCATCTTCTTTCCCATCTTCTTCTTGTGGATGGGCAATGCAGCTAATGTCACCCAATTCAGACCTGGAGACCCTACAACTTGGTTAAGGTTTTTTATACCTATTTTCATAGTCTTCACAGGTAAAATTGTTGGCACACTCATTTCTGGGGCAATACTTGGATTTAACTGGCGGGAATCTATTTTTATCGGATTGCTCCTCATCACCAAAGGCCATTTTCAAATCTACATGGCAATCAAAGTGTTGACTTGTCGCATCAAAGAGGATGTCGACACGGGCCTTCTGTCGGTGGCATCAATATTTTTCGCAGTGGTGCATGCCCCTGCAGTTGTGACACAGATCATCAAACGTGCCAGGAAAAGGGCACCTACTCACAGCAACGCCCTCCAATTGCTAAAGCCATCAAGCGAGTTGAGAATATTCTTGTGCCTTCACGGACTTGATAATGTTCCTGCTTCCATCAACTTCATGGAGATCTCAAGAGGGATATCAGACCCTGGCATGGTAATATATGTCGCAGAAATTATTGAATTAACTGAACATATATCATCAATTATGGAGAGTGGTGAAGGAGTACAAAGTAATACTATAAAAGACAAGGCTGTGGTAGAGATGAGAGAACAAATAACGAACTTGTTTCAAGCGTACATAGATAATGATGGAGATGGTATTACTCTCAAGAGAGCGTTGGCACTGTCAACAATCAATAACATGGCACAGAACATCTGCGTTTTAGCAGAGGACTTGATGATAGCCCTCATTATACTTCCATTCCACAGGAACCAGCGTCAGGACGGAAAATTGGATGGTGGAAATCCAGGCTTCAGACATGTGAACCGAAAGTTATTAAAGAACTCTCCTTGTTCGGTGGGAATTCTAGTGAACAGAGGTTTTGGGTCAATTGGGAAAATATCAAGGTCTCAGCCATCAGTTAAAGTAGCAGCAATATTCATTGGCGGAAGAGATGATAGAGAGGCACTTTGTTATGTGGGTCGTGTGGCATGGCATCAGGGAGTACACGTGACAGTGATAAGATTCCTGGTAGATACCAGTGCAGAATCTACAAGACTGGCGGCTTATAGGGTCAGCCTCCCAGAGGAGGAGGAGATGGGATTGGATGATGAATGCTTTGCACAGTTCTATGAACAGCATATAGTTGGAGGTCGCATTGCTTATTTGGAGAAGCATCTTGCAAATGCATCAGAGACCTTCTCTACTCTTAGATCATTTGAAGGGGAATACTCACTTGTCATTGTAGGAAGAAAAGCTGGAGCAAACTCCGTATTGACAAAGGGTATGAATGACTGGCAACAGTGTCCAGAACTCGGACCAATAGGGGACGTTCTTTCAGGACCAGACTTTTCAAAGTCAGTCACTGTATTGATAATTCAACAACACAAACTTAGAGGAGAACTAGATGGCCTTGACGAGGACTTCACTATCATGTAG 2361 0.4405 MAIAFTQCSEKLGYLILQLAKNFMVYMAMVLACNGLHFLLKPYSQPRITSDIVVGVVLGNIPFLRKLFDEFNRAFGFIMDFGMMCYMFALGIEMDPSLLFKRPNKDALVAYTAILCTFAVSLSLLPFLHFFSRLTGVAFTISVSALLASSASPVLTRLLTNMKIGKSDIGKLVIAAGMHSDLVCLLIFSICYIFMPTDAYCIGHHSERTLKNDIQTIIAVVVQTTFTAMVSPVFMAWVNNENPEGRPMKGSHLVLSVAFMVLICSPSTLYDFSPVLSAFMTGICLPRDGRVSKWIISKINYILSTIFFPIFFLWMGNAANVTQFRPGDPTTWLRFFIPIFIVFTGKIVGTLISGAILGFNWRESIFIGLLLITKGHFQIYMAIKVLTCRIKEDVDTGLLSVASIFFAVVHAPAVVTQIIKRARKRAPTHSNALQLLKPSSELRIFLCLHGLDNVPASINFMEISRGISDPGMVIYVAEIIELTEHISSIMESGEGVQSNTIKDKAVVEMREQITNLFQAYIDNDGDGITLKRALALSTINNMAQNICVLAEDLMIALIILPFHRNQRQDGKLDGGNPGFRHVNRKLLKNSPCSVGILVNRGFGSIGKISRSQPSVKVAAIFIGGRDDREALCYVGRVAWHQGVHVTVIRFLVDTSAESTRLAAYRVSLPEEEEMGLDDECFAQFYEQHIVGGRIAYLEKHLANASETFSTLRSFEGEYSLVIVGRKAGANSVLTKGMNDWQQCPELGPIGDVLSGPDFSKSVTVLIIQQHKLRGELDGLDEDFTIM* 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0097 786 Pfam Sodium/hydrogen exchanger family 27 416 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Vra2g0097 786 Gene3D - 20 428 IPR038770 -
Vra2g0097 786 PANTHER CATION/H + ANTIPORTER 4 784 - -
Vra2g0097 786 PANTHER CATION/H+ EXCHANGER 3 4 784 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0097 Vra-Chr2 773075 777864 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0097 8 786 Antiporter Super Family AT3G52080 48.070 0.0 755
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0097 - - gmx:100815945 1224.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0097 2 773075 777864 Vra5g2052 5 26149075 26152731 PCT