Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0074 ATGAAACCTTTTCTTCTCTTTCTCACATTCTTCTTCCTCTGCCAAACACACCCACTCCCAGTTCTCTCTGCCACAACCCTGCCTCTCCAACTCATCTCCCTCCTCTCAATTAAATCATCCCTCCAAGACCCTCTTAATAACCTCCACGACTGGGATCCCTCCTCCACCTTCTCCAACTCCAGTCCCCAACACCCAATATGGTGTTCATGGAGAGGCATCACATGCCACTCCAAAACATCACAGATCACTACCCTCGACCTCTCCCACCTCAATCTCTCCGGCTCAATCTCACCCCAAATCCGCCACCTGTCCACCTTAAACCACCTTAACCTCAGTGGAAATGACTTCAGCGGGAGTTTCCAATACGCCATTTTTGAACTAGCAGAACTCAGAACTCTTGACATCAGCCACAACTATTTCAACTCAACCTTCCCACCCGGCACATCAAAGCTCAAGTTCCTCAGGCACTTCAACGCCTACAGCAACAGCTTCACCGGGCCCCTCCCCCAAGAGTTAACCAGCCTTCGTTTTCTGGAACACCTGAACCTCGGCGGAAGCTACTTCAGTGACAGGATTCCACTAAGCTATGGCACTTTCCCAAGACTCAAGTTTCTAGACTTAGCCGGCAACGCATTGGGAGGTTCACTTCCACCCCAATTAGGCCACTTGACTGAACTGGAACACTTGGAAATTGGATACAACAATTTCTCAGGAACACTACCTTCGGAACTGTCATTGCTCTCTAATCTCAAATACTTGGACATCTCATACGCCAACATCTCAGGGAACGTGATTCCAGAGCTGGGAGACCTCACCAACCTAGAGACACTTTTGCTGTTCAAGAACAGGTTAACAGGAGAAATCCCACCAACCATAGGAAGATTGAAGTTTCTAAAAAGCCTTGACCTCTCAGATAACGAACTCACAGGGCCAATCCCCACCCAAGTCACCATGCTAACGGAACTAACCACGCTCAACCTGATGGAAAACAACCTAACCGGAGAAATACCACAGGGAATTGGAGACCTACCAAAGCTTGAGACTCTGTTCCTCTTCAACAACTCACTCACCGGAACCCTCCCGCAGCAACTTGGTTCCAACGGGTTACTACTGAAACTAGACGTTTCGACAAACTCACTCGAAGGTCCAATCCCTGAAAATGTCTGCAAAGGTAACAGGCTCGTGAGACTCATACTCTTTCTCAACAAGTTCAGTCATACCCTTCCACCATCTCTTGGGAGCTGCACCTCACTCGCTAGGGTTCGCATCCAAAACAATTTCCTCAACGGTTCAATCCCCGAAGGCCTCACGCTCCTCCCTAACCTTACATTCCTAGATATCAGCAGCAACAACTTCCAGGGTCGAATTCCGGAACACTTAGGTAACTTGCAGTACTTCAACATCTCCGGAAACTCTTTCGGAACCTCCTTACCTGCGTCTATTTGGAATGCAACTAATCTCGCGATCTTCTCCGCGGCTTCGTCGAACATCACCGGTCAAATTCCAGATTTCATTGGCTGTCAGCAACTGTATAAGCTCGAATTGCAGGGAAATTTTATCAACGGTACGATTCCATGGGACATTGGACACTGTCAGAAGCTGATTTTACTCAATCTGAGTCGAAACTCACTCACCGGAATCATTCCCTGGGAAATCTCCACTCTCCCTTCCATCACCGACGTTGATCTCTCTCACAATTCCCTCACCGGAACCATTCCGTCGAACTTCAACAACTGCTCCACTCTCGAGAATTTCAACGTCAGTTTCAACTCCCTCACCGGTCCAATTCCATCGTCCGGCATCTTCCCGAACCTCCATCCGTCCTCCTACTCCGGGAACCAGGGCCTCTGCGGCGGCGTGTTGGCCAAACCCTGCGCTGCTGACGCCCTCGCCGCTGCCGCCGACGACCAGGTCGACGTCCGCCGCCAGCAGCCGAAGCGCACAGCCGGTGCAATCGTGTGGATCGTGGCCGCCGCGTTCGGCATCGGGCTCTTCGTGCTGGTTGCCGGGACGCGGTGCTTCCACGCGAACTACAACCGGCGGTTCGGAGAGGAGGTCGGGCCGTGGAAGTTAACGGCGTTCCAGCGGCTGAATTTCACGGCGGACGACGTGCTGGAGTGCTTGTCGATGTCCGATAAGATATTAGGAATGGGATCGACGGGAACAGTGTACCGCGCCGAAATGACAGGTGGAGATATCATAGCGGTTAAGAAGCTTTGGGGAAAACAAAAGGAGAATATCCGACGGAGGAGAGGGGTTCTGGCCGAGGTGGAGGTGTTGGGAAACGTGAGGCACAGGAATATCGTGAGGTTGTTAGGGTGCTGCAGCAACAGGGAGTGCACCATGCTGCTCTACGAGTACATGCCCAACGGCAACTTGGATGATTTATTGCATGCCAAAAACAAAGGTGATAATCTCGTCGCTGATTGGTTCACAAGGTACAAGATCGCCTTGGGCGTTGCTCAGGGAATCTCCTACCTCCACCACGACTGCGACCCCGTCATCGTCCACCGCGATCTCAAACCCAGTAACATTCTACTGGACGCCGAGATGGAGGCAAGAGTCGCCGATTTCGGCGTTGCCAAGTTGATTCAGACCGACGAATCCATGTCCGTCATTGCCGGATCCTACGGCTACATTGCTCCAGAATATGCTTACACCCTTCAAGTGGATGAGAAGAGTGACATTTACAGCTATGGGGTGGTGTTGATGGAGATTCTGAGCGGAAAACGTTCTGTGGAAGCAGCATTTGGAGATGGGAACAGCATAGTGGATTGGGTGAGATCAAAGATAAAATCAAAAGATGGAATTGATGACATATTGGACAAAAATGCAGGAGCAGGTTGCAGTTCAGTAAGAGAAGAGATGATTCAGATGCTCAGAATTGCATTGCTTTGCACCAGTAAAAATCCTGCAGATAGACCTTCTATGAGGGATGTTGTGTTGATGCTGCAAGAGGCAAAGCCAAAGAGGAAATTGCAGGATAGTGTTGTAGGTGGATTTGGAGGGGACAATGTCGTTGCTGCTCCTGACATTCCCTTTCCACACAAGCCAATTGCAGAATGCTAA 3069 0.5051 MKPFLLFLTFFFLCQTHPLPVLSATTLPLQLISLLSIKSSLQDPLNNLHDWDPSSTFSNSSPQHPIWCSWRGITCHSKTSQITTLDLSHLNLSGSISPQIRHLSTLNHLNLSGNDFSGSFQYAIFELAELRTLDISHNYFNSTFPPGTSKLKFLRHFNAYSNSFTGPLPQELTSLRFLEHLNLGGSYFSDRIPLSYGTFPRLKFLDLAGNALGGSLPPQLGHLTELEHLEIGYNNFSGTLPSELSLLSNLKYLDISYANISGNVIPELGDLTNLETLLLFKNRLTGEIPPTIGRLKFLKSLDLSDNELTGPIPTQVTMLTELTTLNLMENNLTGEIPQGIGDLPKLETLFLFNNSLTGTLPQQLGSNGLLLKLDVSTNSLEGPIPENVCKGNRLVRLILFLNKFSHTLPPSLGSCTSLARVRIQNNFLNGSIPEGLTLLPNLTFLDISSNNFQGRIPEHLGNLQYFNISGNSFGTSLPASIWNATNLAIFSAASSNITGQIPDFIGCQQLYKLELQGNFINGTIPWDIGHCQKLILLNLSRNSLTGIIPWEISTLPSITDVDLSHNSLTGTIPSNFNNCSTLENFNVSFNSLTGPIPSSGIFPNLHPSSYSGNQGLCGGVLAKPCAADALAAAADDQVDVRRQQPKRTAGAIVWIVAAAFGIGLFVLVAGTRCFHANYNRRFGEEVGPWKLTAFQRLNFTADDVLECLSMSDKILGMGSTGTVYRAEMTGGDIIAVKKLWGKQKENIRRRRGVLAEVEVLGNVRHRNIVRLLGCCSNRECTMLLYEYMPNGNLDDLLHAKNKGDNLVADWFTRYKIALGVAQGISYLHHDCDPVIVHRDLKPSNILLDAEMEARVADFGVAKLIQTDESMSVIAGSYGYIAPEYAYTLQVDEKSDIYSYGVVLMEILSGKRSVEAAFGDGNSIVDWVRSKIKSKDGIDDILDKNAGAGCSSVREEMIQMLRIALLCTSKNPADRPSMRDVVLMLQEAKPKRKLQDSVVGGFGGDNVVAAPDIPFPHKPIAEC* 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0074 1022 SMART LRR_typ_2 271 295 IPR003591 -
Vra2g0074 1022 SMART LRR_typ_2 199 222 IPR003591 -
Vra2g0074 1022 SMART LRR_typ_2 555 578 IPR003591 -
Vra2g0074 1022 SMART LRR_typ_2 460 484 IPR003591 -
Vra2g0074 1022 SMART LRR_typ_2 343 367 IPR003591 -
Vra2g0074 1022 SMART LRR_typ_2 127 151 IPR003591 -
Vra2g0074 1022 SMART LRR_typ_2 319 342 IPR003591 -
Vra2g0074 1022 SMART LRR_typ_2 223 247 IPR003591 -
Vra2g0074 1022 ProSitePatterns Serine/Threonine protein kinases active-site signature. 835 847 IPR008271 GO:0004672|GO:0006468
Vra2g0074 1022 Pfam Leucine rich repeat N-terminal domain 30 75 IPR013210 -
Vra2g0074 1022 Pfam Protein kinase domain 712 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra2g0074 1022 ProSitePatterns Protein kinases ATP-binding region signature. 715 738 IPR017441 GO:0005524
Vra2g0074 1022 Gene3D Transferase(Phosphotransferase) domain 1 788 999 - -
Vra2g0074 1022 Gene3D Ribonuclease Inhibitor 298 387 IPR032675 -
Vra2g0074 1022 SUPERFAMILY RNI-like 85 404 - -
Vra2g0074 1022 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE TDR ISOFORM X3 4 1009 - -
Vra2g0074 1022 ProSiteProfiles Protein kinase domain profile. 709 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra2g0074 1022 Gene3D Ribonuclease Inhibitor 31 192 IPR032675 -
Vra2g0074 1022 Gene3D Ribonuclease Inhibitor 193 292 IPR032675 -
Vra2g0074 1022 Gene3D Ribonuclease Inhibitor 506 627 IPR032675 -
Vra2g0074 1022 Pfam Leucine rich repeat 509 568 IPR001611 GO:0005515
Vra2g0074 1022 Gene3D Phosphorylase Kinase; domain 1 692 787 - -
Vra2g0074 1022 Pfam Leucine Rich repeat 297 310 IPR001611 GO:0005515
Vra2g0074 1022 Gene3D Ribonuclease Inhibitor 388 461 IPR032675 -
Vra2g0074 1022 Gene3D Ribonuclease Inhibitor 462 505 IPR032675 -
Vra2g0074 1022 Pfam Leucine Rich Repeat 441 463 IPR001611 GO:0005515
Vra2g0074 1022 SUPERFAMILY L domain-like 313 617 - -
Vra2g0074 1022 SMART serkin_6 709 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra2g0074 1022 SUPERFAMILY Protein kinase-like (PK-like) 712 984 IPR011009 -
Vra2g0074 1022 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 4 1009 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0074 Vra-Chr2 607989 612174 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0074 3 999 Receptor kinase-like Gene Family AT1G08590 43.038 0.0 759
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Vra2g0074 Pkinase 4.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0074 - - gmx:100809695 1815.05