Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0055 ATGGAGGTCATATATTGCAAGCAGCTTATGACGTCCCTTTTCATAATTCTTTCTTTTAGTTTCACCGCACACGGTGGCAGAAAACTAAGTGAAAGACCATACCAAGAAGCCAGCACGGTGTTCATCAGAACATCTTGTAGTTCAACAACATATCCAAGACTCTGTTACAGCTCCCTGGTGAAGCATGCAGACTTGATCCAAACAAATCGCGTGGTGTTAGCCGGGACGGCCCTGAATGTGACTCTTGCGTCGGCGAAATCAACATCGGCAATGATTAGGACACTGGGAAAGAGACAGGGGCTGAAACCAAGAGAGGTTGCGGCGATGAAGGACTGTGTGGAGGAGCTGGGTGACTCGGTGGATGAACTCAGAAGGTCCATCGATGAGATGAGTCATCTCAGAGAATCAAACTTTGAGATGACGATGAGCGACGTGCAAACGTGGGTGAGTGCTGCTCTGACGGATGAGAGCACCTGCACCGATGGCTTCCAAGAGACTGCCGCTGCTGCTACAAATATTAAGAACACTGTGAGAGGTCAAGTTGTGCAGGTAGCACAATTGACCAGCAATGCATTGGCTTTGATAAATCAGCTAGCCAATTCTCATGGTTAA 612 0.4804 MEVIYCKQLMTSLFIILSFSFTAHGGRKLSERPYQEASTVFIRTSCSSTTYPRLCYSSLVKHADLIQTNRVVLAGTALNVTLASAKSTSAMIRTLGKRQGLKPREVAAMKDCVEELGDSVDELRRSIDEMSHLRESNFEMTMSDVQTWVSAALTDESTCTDGFQETAAAATNIKNTVRGQVVQVAQLTSNALALINQLANSHG* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0055 203 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 198 IPR035513 -
Vra2g0055 203 SMART PMEI_2 37 194 IPR006501 GO:0004857
Vra2g0055 203 TIGRFAM PME_inhib: pectinesterase inhibitor domain 13 198 IPR006501 GO:0004857
Vra2g0055 203 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 200 IPR035513 -
Vra2g0055 203 Pfam Plant invertase/pectin methylesterase inhibitor 41 194 IPR006501 GO:0004857
Vra2g0055 203 PANTHER PECTINESTERASE INHIBITOR-LIKE 13 198 - -
Vra2g0055 203 PANTHER 21 KDA PROTEIN-LIKE 13 198 - -
Vra2g0055 203 CDD PMEI-like_3 44 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0055 Vra-Chr2 467621 468408 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0055 25 201 Carbohydrate Esterase AT3G14310 32.044 8.95e-24 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0055 - - gmx:100305537 322.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0055 2 467621 468408 Vra2g0055 2 467621 468408 ECH