Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0049 ATGTCGTCCAACCCTCCCCCGCCGCCGCACTCTTCGCACAAACCCGGTCAAGACCATCCTGCCCCTGGAAAACCGTCATCGCCAGCCGGAAGAGCTAAGCTCCTGAAGATCCCGCCCATTCCTATTCGACGGAGTAATTTAGGCAATGAAGAGGAGAAAGAAGAGGAAGATGAATGCTCTGAATCTTCTTCCATCTTGCTGGCGTCCTCTTTAGGGCTCAATAACATTCGAACGCGTTCTTCCGCTTCGCCTCTTCGCTATTCCTCCTCCGTTGGCGCTCCTTCCTTTCTCACACAGAATGCTGCTGTCACCATCAATGACGCCAGATTTAGAACAAGATTGAATTCCCATCCACAAAGAGACCTAGGGGAAAAAGTTCATTTGCATCAATCCAGATCGCTCAGAGCTCATTCGCAACTCATTCCTGTGCTAGAGGGTCATCATGGAGCTTTCGCCAAAGAAATGCAATCCCCACGTTTTCAGGAAATCTTGCGACTTACTAGTGGACGCAAAAAGAGAAATCCTGATATCAAAAGCTTTTCCCATGAACTCAACTCCAAGGGAGTCAGACCATTTCCAATCTGGAAACATCGTGCCTTTGGCCACATGGAGGAAGTCATGGGGGCGATTAGAGCTAAGTTTGAGAAATTAAAGGAAGAAGTTGATTCTGACTTGGGTGGTTTCGCTGGAGATTTGGTGGGCATTCTTGAAAAAAACTTAGTGTGTGATCGTGAATGGAGAGAGAGGCTGGAGGATCTGTTGATTGTTGCTCAACAATGTGCAAAGATGTCTCCTACCCAGTTTTGGATCAAATGCGAGACTATAGTTCAAAATCTAGATGACAAACGTCAAGAATTGCCAGTGGGGATACTCAAGCAAGCTCATACACGTCTACTGTTTATTCTCACTCGTTGCACTCGATTAGTGCAATTTCAGAAGGAAAGCGGAATTGAACAAGACCACATTCTGGGTCTTCACCAACTCAGCGACCTTGGGGTCTATTCTGAGCAAATTTTGAAGGCTTCACAGGAAAATTCTAGTATTCAACCTGCTGGACACGAGACCTCTGACAAACAGTTAAAAATGTCACGTAGTAAAGAGAAAGACAAACCGATAACAACACAGGGTAAAGCTGACCAACAAGTAAGTGTGGCGATTGACAACCCGGAGGTTGGTACAGCCAAGAGTGTTGAATCAACTCCTGGCAGCTATAGGATGTCTTCTTGGAGAAAGTTTCCAACTGCTGAGAAAAAGCGAAAAGACCAAGATGCTGCAGATACCCCATCCAAAGGTGAAATGGACCACTTGCTAATAAATGCTGAAAATTTGGATACTTCCTCTTGTCATCCTGATCATTCACAATCATCCTCAAGAACACGAAAGGTTTCTTGGGGATTTTGGGGAGACCACCATACTCTTACATATGGGGATTCGATGATATGCAGGATTTGTGAGGTTGAAATACCGATTGTACATGTGGAGGAGCATTCAAGAATATGCACAATTGCGGATAGATGTGATTTGAAAGGTTTAACTGTAAACGAGCGGCTTGAAAGAGTTTCTGAAACCATTGAAAGGATAATGGAATTCTGGACACCCAAAAGCACTGATACTCCTGGAGAAAGCTTTGACCTCGCCGCTTCAAATGTGCTTGAAGAGTTCAATGATTTATCTCTAGAGAGAAATAACCTGACACTTAGATGCTCTGAAGACATGCTCGACTCTACAGATCCTGACAATACTTTTCTCATGGACGATCTGAACCTTTCACCCAGAACATCATGCGAGGCTCGCATCTGTGTAAAACATGATCATGGAACAAAGGTATCTTCAGCTGGGAGCTTGACACCGAGATCACCATTGGTAACACCACGAACCACTCAGGTGGAACTGTTACTAAGTGGACGGAGAACATTGTCTGAACTTGAAAGTTGTGAACAGATAAGCAAGCTAGTTGAAATAGCCCGTGCTGTCGCAAATGTGAACAACTGTGACTACAGTGCTCTGGAGTATATGCTTGATCGCTTAGAAGACCTGAAATATGCCATTCAAGACAGAAAAGTGGATGCCCTTATTGTGGAGACTTTTGGACGACGAATAGAGAAACTTTTGCAGGAGAAATATATATCCCTTTGCGGGCAGATAGAAGATGAAAAGGTGGACTCATCAACTAGCGTAGCTGATGAAGAGAGTTCAGTGGAAGATGATGCAGTTCGTAGCCTTCGTGCTAGCCCTATTAATACTTGTTCCAAGGACCGAACCTCTATTGAAGACTTTGAAATAATAAAACCCATAAGTAGGGGTGCATTTGGACGAGTTTTTCTTACCCGAAAAAGAGCAACCGGTGATTTATTTGCTATAAAGGTTCTGAGAAAGGCCGATATGATCCGTAAAAATGCAGTTCAAAGTATTTTGGCTGAGAGAGACATACTTATATCAGTTCGAAATCCTTTTGTGGTTCGATTTTTCTACTCTTTCACATGTCGGGAAAATCTTTATCTAGTTATGGAGTACTTGAATGGTGGAGATCTTTATTCGATGTTGAGAAATCTAGGGTGCTTAGATGAAAACATGACTCGAGTATATATTGCAGAAGTTGTTCTTGCATTGGAGTATTTGCATTCCTTAAATGTGATTCACAGAGACCTGAAGCCAGATAACTTACTGATTGGTCAAGATGGCCATATTAAGTTAACAGATTTCGGGCTCTCCAAGGTTGGTCTTATCAACAGCACAGATGATTTATCAGCGCCATCGTTTTCGGCCATCCTAGAAGACGACGATATGCCAAAACCTAGCAATTCTTCAAAACGGGAAGAGCGTCAAAGACAATCAGTAGTTGGCACTCCGGATTACCTGGCACCTGAAATACTTCTTGGCATGGGACATGGTGCAACTGCTGATTGGTGGTCTGTGGGTGTCATAATGTATGAGCTTCTTGTGGGTATTCCACCATTTAATGCTGAACATCCACAGCAAATTTTTGATAACATAATTAACAGAGACATACAATGGCCCAATATTCCTGATGAGATCAGCTTTGAAGCATATGATTTGATAAATAAATTATTGAACGAAAACCCAGTCCAAAGATTAGGCGCGACAGGGGCTACAGAAGTTAAGCGCCACGCCTTCTTCAAAGATATCAATTGGGATACACTAGCAAGGCAGAAGGCCATGTTTATTCCATCGGCTGAAGGTCATGATGATACAAGTTATTTTATGAGCCGGTACATTTGGAATCCCGAGGACGAACACTGTCTCGGAGGTAGTGATTTTGATGAGATTAGTGGTTCCGGCAGCAGTGGTTCCGGCAGCGCTGTGTTAGATGAAGATGGTGATGAGTGTGGTAGTTTAACAGAGTTCGGTGCTCATGCTCTTGTTGATCCGTACTCGTTTAGTAATTTCTCGTTTAAGAACTTGTCTCAGTTGGCTTCTATCAATTATGATTTGGTGATTAGGAACTCCGGGGAATCAACTCAATGA 3486 0.4337 MSSNPPPPPHSSHKPGQDHPAPGKPSSPAGRAKLLKIPPIPIRRSNLGNEEEKEEEDECSESSSILLASSLGLNNIRTRSSASPLRYSSSVGAPSFLTQNAAVTINDARFRTRLNSHPQRDLGEKVHLHQSRSLRAHSQLIPVLEGHHGAFAKEMQSPRFQEILRLTSGRKKRNPDIKSFSHELNSKGVRPFPIWKHRAFGHMEEVMGAIRAKFEKLKEEVDSDLGGFAGDLVGILEKNLVCDREWRERLEDLLIVAQQCAKMSPTQFWIKCETIVQNLDDKRQELPVGILKQAHTRLLFILTRCTRLVQFQKESGIEQDHILGLHQLSDLGVYSEQILKASQENSSIQPAGHETSDKQLKMSRSKEKDKPITTQGKADQQVSVAIDNPEVGTAKSVESTPGSYRMSSWRKFPTAEKKRKDQDAADTPSKGEMDHLLINAENLDTSSCHPDHSQSSSRTRKVSWGFWGDHHTLTYGDSMICRICEVEIPIVHVEEHSRICTIADRCDLKGLTVNERLERVSETIERIMEFWTPKSTDTPGESFDLAASNVLEEFNDLSLERNNLTLRCSEDMLDSTDPDNTFLMDDLNLSPRTSCEARICVKHDHGTKVSSAGSLTPRSPLVTPRTTQVELLLSGRRTLSELESCEQISKLVEIARAVANVNNCDYSALEYMLDRLEDLKYAIQDRKVDALIVETFGRRIEKLLQEKYISLCGQIEDEKVDSSTSVADEESSVEDDAVRSLRASPINTCSKDRTSIEDFEIIKPISRGAFGRVFLTRKRATGDLFAIKVLRKADMIRKNAVQSILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSMLRNLGCLDENMTRVYIAEVVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLINSTDDLSAPSFSAILEDDDMPKPSNSSKREERQRQSVVGTPDYLAPEILLGMGHGATADWWSVGVIMYELLVGIPPFNAEHPQQIFDNIINRDIQWPNIPDEISFEAYDLINKLLNENPVQRLGATGATEVKRHAFFKDINWDTLARQKAMFIPSAEGHDDTSYFMSRYIWNPEDEHCLGGSDFDEISGSGSSGSGSAVLDEDGDECGSLTEFGAHALVDPYSFSNFSFKNLSQLASINYDLVIRNSGESTQ* 1162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0049 1161 MobiDBLite consensus disorder prediction 1 62 - -
Vra2g0049 1161 SUPERFAMILY Protein kinase-like (PK-like) 743 1072 IPR011009 -
Vra2g0049 1161 Pfam Protein kinase domain 759 1046 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra2g0049 1161 ProSitePatterns Serine/Threonine protein kinases active-site signature. 878 890 IPR008271 GO:0004672|GO:0006468
Vra2g0049 1161 CDD STKc_MAST_like 765 1051 - -
Vra2g0049 1161 Gene3D Phosphorylase Kinase; domain 1 757 1074 - -
Vra2g0049 1161 ProSiteProfiles Protein kinase domain profile. 759 1046 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra2g0049 1161 MobiDBLite consensus disorder prediction 1 15 - -
Vra2g0049 1161 MobiDBLite consensus disorder prediction 411 430 - -
Vra2g0049 1161 SMART serkin_6 759 1046 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra2g0049 1161 MobiDBLite consensus disorder prediction 930 945 - -
Vra2g0049 1161 PANTHER SERINE/THREONINE PROTEIN KINASE IRE-RELATED 29 1160 - -
Vra2g0049 1161 MobiDBLite consensus disorder prediction 343 431 - -
Vra2g0049 1161 MobiDBLite consensus disorder prediction 924 946 - -
Vra2g0049 1161 Gene3D Transferase(Phosphotransferase) domain 1 843 1064 - -
Vra2g0049 1161 PANTHER SERINE/THREONINE-PROTEIN KINASE 29 1160 - -
Vra2g0049 1161 MobiDBLite consensus disorder prediction 1091 1112 - -
Vra2g0049 1161 ProSiteProfiles AGC-kinase C-terminal domain profile. 1047 1148 IPR000961 GO:0004674|GO:0005524|GO:0006468
Vra2g0049 1161 MobiDBLite consensus disorder prediction 357 374 - -
Vra2g0049 1161 MobiDBLite consensus disorder prediction 393 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0049 Vra-Chr2 439328 448252 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0049 32 1161 AGC Kinase Gene Family AT5G62310 62.596 0.0 1385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Vra2g0049 Pkinase 5.8e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0049 - - gmx:100806311 1887.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0049 2 439328 448252 Vra2g0049 2 439328 448252 ECH