Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra2g0036 | ATGTCACCTCTTTTTGATCACGTAGGAATTGGAGGTGGTCAGGAAGCATCAGCTGTTACAACTACCGATCATCGTGCTGGAAAATTTGAAGCCAAATTCTTTGATAAGATTCTTGAAGAAGAAATTGGGGGCGTGAAAGGGCATTTTGGACCAATTAACGCATTGGCTTTTAATCCTGATGGAAAAAGTTTTTCAAGTGGAGGTGAAGATGGTCTTTATGTACGGTTGCATCACCTCGACTCAGATTATTTCAACATTAAATTATAG | 267 | 0.3933 | MSPLFDHVGIGGGQEASAVTTTDHRAGKFEAKFFDKILEEEIGGVKGHFGPINALAFNPDGKSFSSGGEDGLYVRLHHLDSDYFNIKL* | 89 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra2g0036 | 88 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I | 1 | 87 | - | - | |
Vra2g0036 | 88 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 45 | 71 | IPR001680 | GO:0005515 | |
Vra2g0036 | 88 | Gene3D | - | 1 | 88 | IPR015943 | GO:0005515 | |
Vra2g0036 | 88 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I | 1 | 87 | - | - | |
Vra2g0036 | 88 | SUPERFAMILY | WD40 repeat-like | 43 | 82 | IPR036322 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra2g0036 | Vra-Chr2 | 362949 | 364744 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra2g0036 | 1 | 88 | Eukaryotic Initiation Factors Gene Family | AT2G46290 | 85.227 | 2.48e-49 | 157 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra2g0036 | K03246 | - | vra:106755975 | 184.882 |