Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0036 ATGTCACCTCTTTTTGATCACGTAGGAATTGGAGGTGGTCAGGAAGCATCAGCTGTTACAACTACCGATCATCGTGCTGGAAAATTTGAAGCCAAATTCTTTGATAAGATTCTTGAAGAAGAAATTGGGGGCGTGAAAGGGCATTTTGGACCAATTAACGCATTGGCTTTTAATCCTGATGGAAAAAGTTTTTCAAGTGGAGGTGAAGATGGTCTTTATGTACGGTTGCATCACCTCGACTCAGATTATTTCAACATTAAATTATAG 267 0.3933 MSPLFDHVGIGGGQEASAVTTTDHRAGKFEAKFFDKILEEEIGGVKGHFGPINALAFNPDGKSFSSGGEDGLYVRLHHLDSDYFNIKL* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0036 88 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I 1 87 - -
Vra2g0036 88 ProSiteProfiles Trp-Asp (WD) repeats profile. 45 71 IPR001680 GO:0005515
Vra2g0036 88 Gene3D - 1 88 IPR015943 GO:0005515
Vra2g0036 88 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I 1 87 - -
Vra2g0036 88 SUPERFAMILY WD40 repeat-like 43 82 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0036 Vra-Chr2 362949 364744 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0036 1 88 Eukaryotic Initiation Factors Gene Family AT2G46290 85.227 2.48e-49 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0036 K03246 - vra:106755975 184.882