Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0007 ATGGTAGACAACGGTGCTTATGACTTACCTGATGGAAATCAATCTGAGAATAGAAAAGCTAAGAAAAGGAAGAAAATGAGTAAAAGTCAGGGCAATGGGGAAGTTGTAAATTCTAATATCACTGTATATGTTGAGCGAAGTGGTGAGACTGACATGATGGAGGGGGACAGAAGTAACGGGGAAGATGCAAAACCTTCCAATGTTAGAACATTGAAAAATGGACTAGTTATTCAGGAACAAGAGAAGGGGAAAAAAGACGGCAAAATCGCAGCTTCAGGAAAAAAGATTAGAATCTATTACACTGGCAAGTTGAAGGAAAATGGAGCTGTCTTTGAGTCAAACGCTGGCCAAACTCCTTTCAAATTTCGCCTTGGTAAAGGAGAGGTTATCGAGGGTTGGGATGTTGGCCTTGAAGGCATGCAAGTTGGAGAAAAGAGAAGACTTGTCATTCCACCAACATTGACGTCTAAGAGTGATGGACACTCTGACAAAATACCACCAAATTCATGGTTGATTTATGACATTGAACTAGTTAAAGTTCATTGA 546 0.4011 MVDNGAYDLPDGNQSENRKAKKRKKMSKSQGNGEVVNSNITVYVERSGETDMMEGDRSNGEDAKPSNVRTLKNGLVIQEQEKGKKDGKIAASGKKIRIYYTGKLKENGAVFESNAGQTPFKFRLGKGEVIEGWDVGLEGMQVGEKRRLVIPPTLTSKSDGHSDKIPPNSWLIYDIELVKVH* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0007 181 MobiDBLite consensus disorder prediction 1 67 - -
Vra2g0007 181 MobiDBLite consensus disorder prediction 30 45 - -
Vra2g0007 181 PANTHER PEPTIDYLPROLYL ISOMERASE 2 181 - -
Vra2g0007 181 MobiDBLite consensus disorder prediction 49 63 - -
Vra2g0007 181 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 2 181 - -
Vra2g0007 181 SUPERFAMILY FKBP-like 32 180 - -
Vra2g0007 181 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 89 178 IPR001179 GO:0003755
Vra2g0007 181 Gene3D - 45 181 IPR046357 GO:0003755
Vra2g0007 181 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 93 181 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0007 Vra-Chr2 152992 154204 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0007 92 178 Calmodulin-binding Proteins AT5G48570 43.182 7.42e-18 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0007 K14826 - vra:106777685 360.533