Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1909 ATGTCGAACGAAACCATTGACCCCCGTCTCCAAATCCGCCCCAACCCCGACGGCAGCTTCACCATGTCCAACGAAACCATTGACCCCTACCACCGTCTCCAAATCCAGCCCAACCCCGACGGCACCTTCACTCGTCTCAACGGTCTCGCAATTCCACACACTGCACCCTCTTCAGATCCCTCTCTTCCCATTCCAGTTCTCACCAAAGACATCACCATCAACCCACACAACCACACATGGCTGCGCTTATTCCTACCACGAACGTTACTCTCCTCTTCCAACCCCAACAAGCTTCCTCTCATCCTTTTCTTTCACGGAAGCGGATTCGTGCTGCTCAGTGCAGCTTCCTCCGTGTTTCATGATTTCTGCGTCCAAATCGCCGATTCTGCTCAGGCCATTGTGGCCTCCGTCGAATACCGTCTCGCGCCGGAGCACCGACTTCCGGCGGCCTACGACGATGGCGCCGAAGCGCTGCGGTGGATCGGAAACTGCGAAGATGAGTGGTTGAATCAGTACGCTGATTATTCAAAGTGTTATCTTATGGGAAATAGTGCTGGGGCAACTATCGCTTACCAGACAGGTCTACGTGCAGTTGAAGAGGTGAACGATCTTGATCGAGTGAAGATCCAAGGGTTGATATTGCGTCAACCATTCTTCGGTGGAGTGCAGAGGACAGAATCGGAGTTAAGGCTTGAGAATAACCCACTCATTCCTCTGAGTGTTACGGATTCGATGTGGGAGTTGGCACTGCCAACTGGTGCTGATCGTGACCATGAATATTGCAGTGTAAGGGCTGGAAATGGGGTTGAGAAATTTGAGAAGATGAGGGAGCTTGGTTGGAGGGTGCTGGTGAGTGGCAACAATGGTGACCCATTGGTGGATCGTGATAAGGAGTTGGTGCAATTGATGGAAGAAAAAGGGGTGAAAGTGGTGAAGGATTTTCAAGAAGAAGGCTGTCATGGAGTTGAACTCTTTGACCCATTGAAAGCAAACCAATTCATTGATTTGGTTAAACAATTCATTAATCCAATCTGTGTTTAG 1041 0.5024 MSNETIDPRLQIRPNPDGSFTMSNETIDPYHRLQIQPNPDGTFTRLNGLAIPHTAPSSDPSLPIPVLTKDITINPHNHTWLRLFLPRTLLSSSNPNKLPLILFFHGSGFVLLSAASSVFHDFCVQIADSAQAIVASVEYRLAPEHRLPAAYDDGAEALRWIGNCEDEWLNQYADYSKCYLMGNSAGATIAYQTGLRAVEEVNDLDRVKIQGLILRQPFFGGVQRTESELRLENNPLIPLSVTDSMWELALPTGADRDHEYCSVRAGNGVEKFEKMRELGWRVLVSGNNGDPLVDRDKELVQLMEEKGVKVVKDFQEEGCHGVELFDPLKANQFIDLVKQFINPICV* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1909 346 PANTHER RECEPTOR GID1, PUTATIVE-RELATED 23 341 - -
Vra1g1909 346 SUPERFAMILY alpha/beta-Hydrolases 55 342 IPR029058 -
Vra1g1909 346 Gene3D alpha/beta hydrolase 30 344 IPR029058 -
Vra1g1909 346 PANTHER ARYLACETAMIDE DEACETYLASE 23 341 - -
Vra1g1909 346 MobiDBLite consensus disorder prediction 1 23 - -
Vra1g1909 346 Pfam alpha/beta hydrolase fold 101 322 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1909 Vra-Chr1 36278639 36281577 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g1909 51 326 Carbohydrate Esterase AT5G16080 35.088 2.05e-50 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1909 - - var:108344974 668.692