Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1902 ATGGCCAGAAAAACCTCACCACCATCTCCTCCAAAGCTTCCAATAATAGGAAATCTCCATCAACTTGGCACTCTCACTCACCGAACTCTCCATTCCTTTGCTCAAACCTATGGCCCTTTAATGTTACTTCACTTTGGAAAGGTGCCAGTTCTTGTGGTCTCAACGGCCGAGGCAGCCCGTGAGGTTATGAAAACCCATGACCTTGTTTTCTCAAATAGACCACATCGTAAGCTGTTTGGTATCTTCTTGTACGATTCCAAAGATGTGGCATCTGCTCCATATGGCAACTACTGGAGGCAGATAAGGAGTATCAGTGTCTTGCATCTTCTCAGTGCAAAAAAGGTTAAATCCTTTGGTGCAGTGAGAGAAGAGGAAATATCCATAATGATGGATAAGATTAAGCAGTGTTGTTGTTCTGTGACGCCTGTGAATTTAACTGATTTATTTTCTACTGTCACAAATGACATAGTGTGCAGAGCTGCTCTCGGAAGGAGATACAGTGGAGGAGAAGGGAATTCTTCTCGTAGGTGTGGTAAGACGTATACGGTTCATTGGGTTAGAGTAATAGGTTTTGGGTTGTGA 582 0.4347 MARKTSPPSPPKLPIIGNLHQLGTLTHRTLHSFAQTYGPLMLLHFGKVPVLVVSTAEAAREVMKTHDLVFSNRPHRKLFGIFLYDSKDVASAPYGNYWRQIRSISVLHLLSAKKVKSFGAVREEEISIMMDKIKQCCCSVTPVNLTDLFSTVTNDIVCRAALGRRYSGGEGNSSRRCGKTYTVHWVRVIGFGL* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1902 193 Gene3D Cytochrome P450 1 188 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1902 193 PANTHER CYTOCHROME P450 71B11-RELATED 3 173 - -
Vra1g1902 193 PRINTS E-class P450 group I signature 34 53 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1902 193 PRINTS E-class P450 group I signature 58 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1902 193 PRINTS E-class P450 group I signature 152 170 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1902 193 SUPERFAMILY Cytochrome P450 7 170 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1902 193 Pfam Cytochrome P450 7 171 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1902 193 PANTHER CYTOCHROME P450 FAMILY PROTEIN 3 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1902 Vra-Chr1 36095770 36099604 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g1902 3 172 Cytochrome P450 AT3G48270 60.000 7.36e-69 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1902 - - vra:106762835 394.815