Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1901 ATGTCTGATATCATCCTATATGATTCCAAAGATGTGGCATCTGCTCCCTACGGCAAATACTGGAGGCAGATAAGGAGTATTTGTGTCTTGCATATTCTCAGTGCAAAAAAGGTTCAATCCTTTGGTGCAGTGAGAGAAGAGGAAATCTCCATAATGATGAAAGAGATTAAACAGTGTTGCTCTTCTTTGATTCCTGTGAATTTAACTGAATTGTTTTCTACAGTCACGAATGACATAGTGTGTAGAGCTGCTCTCGGAACGAGATACAGTGGAGAAGGAAGGAGACAGCTTTGGGAGCTACTGAATGAAATGATGAAGTTGATGGGTGCTCCAGTTATAGGGGACTACATACCTTGGCTTGATTGGGTGGGAAGAGTTAATGGAATGTATGATAGGGCAAAGAGAGTGGCTAAAGAGCTTGATGAATTTTTCGATGAAGTTGTTGATGAGCATGTAAGTAGAAGAGGGCATGATGTGCATGGTGATGATGATGATGAAGAAGAAGGAGAGGAGAATGATCTGGTGGACATTTTGTTGAGGCTCCAAAAGAAAAACAGAACGGGGTTTCAGATTGATAGAACAACCATAAAGGCTTTGATCTTGGATATGTTTGTCGCAGGTACTGATACCGGCTCCTCAATCCTGGGATGGATAATGACAGAACTCTTGAGGCACCCAAATGTGATGCAGAAGCTAAAAGATGAGATAAGGAATGTGGTTAGTGGTAGAACTCGCATAACTGAGGAAGATTTAAGCAGCATGCCTTATTTGAAAGCAGTGATTAAAGAAAGTTTTCGATTACATCCCCCAGCTCCTTTGTTGCTTCCAAGGGAATCCATGGAAGATACCAAAGTGATGGACTATGACATTGCAGCAGGCACACAAATCATAGTTAATGCTTGGGCAATAGCAAGAGATCCTTGTTACTGGGAAAAAGCTGAAGAGTTTGAAGCAGAAAGATTCTTAAAGAGTTCAATAGATGTGAAAGGACATNATTTTGAAGTGATACCATTTGGAGCAGGAAGAAGGGGTTGTCCAGGAATAATGTTTGCCATGAATATGATTGAGTTGGTCATGGCAAACCTCATTCATCAGTTTAATTGGGAAGTGCCAAGTGGAGTAATGGGAGATCAGACACTCGACATGACTGAATCTACAGGGTTGACCAGTCATAGAAAATTTCCTCTCATAGCATTTGCCTCCCACCATGCATGA 1215 0.414 MSDIILYDSKDVASAPYGKYWRQIRSICVLHILSAKKVQSFGAVREEEISIMMKEIKQCCSSLIPVNLTELFSTVTNDIVCRAALGTRYSGEGRRQLWELLNEMMKLMGAPVIGDYIPWLDWVGRVNGMYDRAKRVAKELDEFFDEVVDEHVSRRGHDVHGDDDDEEEGEENDLVDILLRLQKKNRTGFQIDRTTIKALILDMFVAGTDTGSSILGWIMTELLRHPNVMQKLKDEIRNVVSGRTRITEEDLSSMPYLKAVIKESFRLHPPAPLLLPRESMEDTKVMDYDIAAGTQIIVNAWAIARDPCYWEKAEEFEAERFLKSSIDVKGHXFEVIPFGAGRRGCPGIMFAMNMIELVMANLIHQFNWEVPSGVMGDQTLDMTESTGLTSHRKFPLIAFASHHA* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1901 404 Gene3D Cytochrome P450 1 397 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1901 404 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 402 - -
Vra1g1901 404 Pfam Cytochrome P450 9 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1901 404 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 338 347 IPR017972 GO:0005506|GO:0016705
Vra1g1901 404 PRINTS P450 superfamily signature 206 223 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1901 404 PRINTS P450 superfamily signature 259 270 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1901 404 PRINTS P450 superfamily signature 336 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1901 404 PRINTS P450 superfamily signature 345 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1901 404 PANTHER CYTOCHROME P450 71B11-RELATED 1 402 - -
Vra1g1901 404 PRINTS E-class P450 group I signature 75 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1901 404 PRINTS E-class P450 group I signature 195 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1901 404 PRINTS E-class P450 group I signature 215 241 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1901 404 PRINTS E-class P450 group I signature 258 276 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1901 404 PRINTS E-class P450 group I signature 299 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1901 404 PRINTS E-class P450 group I signature 335 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1901 404 PRINTS E-class P450 group I signature 345 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1901 404 SUPERFAMILY Cytochrome P450 7 398 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1901 Vra-Chr1 36071664 36073627 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g1901 1 403 Cytochrome P450 AT3G48280 46.782 2.79e-138 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1901 - - gmx:100806940 578.17