Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1899 ATGTCAACTTCTCTGCATGAAAACTCTTCAATCTGGTTTTTCCTTCCAATCGCTACTTTGATCGTCTTCTTTTTACGTACTGTCATCAAATGCAATCATAATTTCAATTCTGCAATGGCCAGAAAAGCCTCACCACCATCTCCTCCAAAGCTTCCAATAATAGGAAATCTCCACCAACTTGGCACTCTCACTCACCGGACTCTCCATTCCTTTGCTCAAACCTATGGCCCTTTAATGTTACTTCACTTTGGAAAGGTGCCAGTTCTTGTGGTCTCAACGGCCGAGGCAGCCCGTGAGGTTATGAAAACCCATGACCTTGTTTTCTCAAATAGACCACATCGTAAGCTGTTTGATATCTTCTTGTACGATTCCAAAGATGTGGCATCTGCTCCATATGGCAACTACTGGAGGCAGATAAGGAGTATCAGTGTCTTGCATCTTCTCAGTGCAAAAAAGGTTCAATCCTTTGGTGCAGTGAGAGAAGAGGAAATNTCCATAATGATGGATAAGATTAAGCAGTGTTGTTGTTCTGTGACGCCTGTGAATTTAACTGATTTATTTTCTACTGTCACAAATGACATAGTGTGCAGAGCTGCTCTCGGAAGGAGATACAGTGGAGGAGAAGGGAGTAAGTTTTGGAAGCCAATGAATGAGATGATGAAGATGTTGGGTGTTCCAGTTATAGGGGATTATATAACTTGGCTTGATTGGGTTGGAAGTGTTAATGGATTGTATGGTAGGGCAAAGAGAGTGGCTAAACAGCTTGATGAATTTTTTGATGAAGTTGTTGATGAGCATGTAAGTAGAAGAGGGCATGATGTGCATGGTGATGATGATGACGACGATGAACATAATGATTTGGTGGACATTTTGCTGAGAATCCAAAAGACAAACGCCTTGGGTTTCCAGATTGATAAAACAGTCATAAAGGCTATAATCCTGGATATGTTTGTCGCAGGCACTGAAACTAGCTCCACAATCCTAGGATGGATAATGACAGAACTCTTGAGGCACCCAAGTGTGATGCAGAAGCTAAAAGATGAGATAAGGAATGTGGTTAGTGGTAGAACTTGCATAACTGAGGAAGATTTAAGCAGCATGCCTTATTTGAAAGCAGTGATTAAAGAAAGTTTTCGATTACATCCCCCAGCTCCCTTGTTGCTTCCAAGGGAATCCATGGAAGCTGCTAAAGTGATGAACTATGACATTGCAGCAGGCACACAGATAATAGTTAATGCTTGGGCAATAGCAAGAGATCCTTGTTACTGGGAAAAAGCTGAAGAGTTTGAAGCAGAAAGATTCTTAAAGAGTTCAATAGATGTGAAAGGACATGATTTTGAAGTGATACCATTTGGAGCAGGAAGAAGGGGTTGTCCAGGAATGATGTTTGCCATGAATGTGATTGAATTGGTCATAGCAAACCTTGTTCATCAGTTTGATTGGGAAGTGCCAGGTGGAGTAGTGGGAGATCAGACACTCGACATGACTGAATCTGCAGGGTTGACCAGTCATAGAAAATTTCCTCTCATAGCATTTGCCTCTTACCATGCATAA 1554 0.4163 MSTSLHENSSIWFFLPIATLIVFFLRTVIKCNHNFNSAMARKASPPSPPKLPIIGNLHQLGTLTHRTLHSFAQTYGPLMLLHFGKVPVLVVSTAEAAREVMKTHDLVFSNRPHRKLFDIFLYDSKDVASAPYGNYWRQIRSISVLHLLSAKKVQSFGAVREEEXSIMMDKIKQCCCSVTPVNLTDLFSTVTNDIVCRAALGRRYSGGEGSKFWKPMNEMMKMLGVPVIGDYITWLDWVGSVNGLYGRAKRVAKQLDEFFDEVVDEHVSRRGHDVHGDDDDDDEHNDLVDILLRIQKTNALGFQIDKTVIKAIILDMFVAGTETSSTILGWIMTELLRHPSVMQKLKDEIRNVVSGRTCITEEDLSSMPYLKAVIKESFRLHPPAPLLLPRESMEAAKVMNYDIAAGTQIIVNAWAIARDPCYWEKAEEFEAERFLKSSIDVKGHDFEVIPFGAGRRGCPGMMFAMNVIELVIANLVHQFDWEVPGGVVGDQTLDMTESAGLTSHRKFPLIAFASYHA* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1899 517 Gene3D Cytochrome P450 32 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1899 517 SUPERFAMILY Cytochrome P450 45 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1899 517 Pfam Cytochrome P450 45 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1899 517 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1899 517 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1899 517 PRINTS E-class P450 group I signature 190 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1899 517 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1899 517 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1899 517 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1899 517 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1899 517 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1899 517 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1899 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Vra1g1899 517 PANTHER CYTOCHROME P450 71B11-RELATED 22 515 - -
Vra1g1899 517 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1899 517 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1899 517 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1899 517 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1899 517 PANTHER CYTOCHROME P450 FAMILY PROTEIN 22 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1899 Vra-Chr1 36047393 36049596 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g1899 41 514 Cytochrome P450 AT3G48270 49.684 5.30e-173 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1899 - - gmx:100806940 749.969