Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1881 ATGTCTCATCAACACCAGCAATCCATTGATCCCTATCGCCACCTCGATCTCGTTCTAAACCCTAACGGCACCCTCACTCGTTCACGTCACATTCCAATCACACCACCAAATTCAGACCCCACTCTCCCAATTCTCACCAAAGACATAACCATCAACCCACAAAACAACACCTGGCTACGTTTATTCTTGCCCCAAGGAGCACTATCCTCAAACGCAGAGCACCAGAAGCTGCCTCTCATAATTTTCTTCCACGGAAGCGGTTTCGTCGTGGCCAGCGCCGCCAACACCATGTTCCACCACTTCTGCTCCGCCATGTCCGCAGCCGTCCCCGCCGTCGTCGCCTCCGTGGAGTATCGCCTCGCCCCGGAGCACCGTCTCCCGGCAGCTTACGACGACGCAGTGGAAGCCTTGGAGTTTGTCAGAAACAGCCAGGAAGAGTGGCTGACGAAACACGCCGACTTAGGTAACTGTTATATCATGGGGAACAGTGCGGGAGCAACAATCGCCTACTTTGCGGGCCTACGTGTGGCCGACACGGTGCGTGATCTTGAGCCGTTGAAGATCCAAGGGCTCATATTGCGGCAGGTGTTTTTTGGTGGGGTCCAGAGGTGTGCGTCCGAGGTAAGGTTAGAGAACGACGGGGTTTTGCCGTTGATCGTAGCGGATTTGCTTTGGGAGTTGGCGCTCCCCGTTGGCGTTGACCGTGATCACGAGTATGCGAATCCGAGGGCTGAGAAGTGGGTTGGGAAATTGGGGAGAGTGAGGGATCTAGGGTGGAGGGTGTTGGTGAGTGGGAACGGTGGGGATCCGTTGATTGATCGTGAGAAAGAGTTGGTGGAGATGTTGAAAGAGAAGGGTGTGGAAGTGGTGAGTGATTTTGAGGAAGAAGGATGTCATGGGGTAGAGTATAGTGATGAATCAAAAGCTGAAAAATTCATTCAAGTAGTGAAACATTTCGTTTCCTCGAGTGATGTTTAG 978 0.5297 MSHQHQQSIDPYRHLDLVLNPNGTLTRSRHIPITPPNSDPTLPILTKDITINPQNNTWLRLFLPQGALSSNAEHQKLPLIIFFHGSGFVVASAANTMFHHFCSAMSAAVPAVVASVEYRLAPEHRLPAAYDDAVEALEFVRNSQEEWLTKHADLGNCYIMGNSAGATIAYFAGLRVADTVRDLEPLKIQGLILRQVFFGGVQRCASEVRLENDGVLPLIVADLLWELALPVGVDRDHEYANPRAEKWVGKLGRVRDLGWRVLVSGNGGDPLIDREKELVEMLKEKGVEVVSDFEEEGCHGVEYSDESKAEKFIQVVKHFVSSSDV* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1881 325 Gene3D alpha/beta hydrolase 12 324 IPR029058 -
Vra1g1881 325 SUPERFAMILY alpha/beta-Hydrolases 19 320 IPR029058 -
Vra1g1881 325 PANTHER ARYLACETAMIDE DEACETYLASE 6 320 - -
Vra1g1881 325 PANTHER RECEPTOR GID1, PUTATIVE-RELATED 6 320 - -
Vra1g1881 325 Pfam alpha/beta hydrolase fold 80 301 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1881 Vra-Chr1 35818015 35819285 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g1881 3 289 Carbohydrate Esterase AT5G16080 34.459 1.82e-49 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1881 - - gmx:100779813 509.99