Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1865 ATGGCTTCCTCTTCGCATTTAGATTGTTCATTGTCACAGAGTGAGGAAAGAGGGCATGAGGGCTCGACTGATGTATCTGGGGACGCTCAGACTGAAAAGTTTTCATCGGTGCTTAACGGGGGAAAAGTTTTTGTTTGCGGTGGGGTTACCGTTGAAGTCCTCGAAAACTCCTGCTCTTCATCGTGCTTAGATTATGGGTGGGCCTCCTGCGACATAGGTCGGATGCTAGGTGGAAAATTATCTAGGTCTCCTGGTGGGCTTCCTCCACAATCACCTATTGCTCAATGGGACAACATCATCAAATTTTTGGATTCACTCATGAGCAGAATGCGTGTAAATCATCCAATGATATATGGTAGGGGTCCAATGCCAACAGGAATGCAAATGGTTCCAATGGTGTTACCAGACGGTCGAATTGGCTATGTCGGCTATGTCTTACAACAACCTAGTGTACAAGCGCCACGCAGCCGACCTCGCAGAAGTGATTGGAGTAATGGTCCAAGTGGGCAGCCAGGACGAGGAGGTGATAGTGGCAATGATGAAGGCAATCGTAGTAGAAGGCATTGTCTTTGA 573 0.4782 MASSSHLDCSLSQSEERGHEGSTDVSGDAQTEKFSSVLNGGKVFVCGGVTVEVLENSCSSSCLDYGWASCDIGRMLGGKLSRSPGGLPPQSPIAQWDNIIKFLDSLMSRMRVNHPMIYGRGPMPTGMQMVPMVLPDGRIGYVGYVLQQPSVQAPRSRPRRSDWSNGPSGQPGRGGDSGNDEGNRSRRHCL* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1865 190 PANTHER GEO13361P1-RELATED 113 188 - -
Vra1g1865 190 MobiDBLite consensus disorder prediction 150 172 - -
Vra1g1865 190 MobiDBLite consensus disorder prediction 150 190 - -
Vra1g1865 190 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN Q 113 188 - -
Vra1g1865 190 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1865 Vra-Chr1 35583616 35586149 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g1865 61 114 Myosins gene family AT4G33200 59.259 7.12e-13 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1865 K13161 - vra:106769213 395.586