Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1775 ATGCGACCACTCCCCGCCCTTGTCAGTGCCCGAATATTCAAATGTCACATCCCTAAACCTCTGAACATTCCTCTTGTTCAAAACTTATTATCACATTCCCTCTCGTTCCCTCTCATCTCTAATTTTTCGTCACTCCTCCCTCCGAACACTCCGAGAACACTCCTCCGTACCCGTGCTTTCACCAGCTCCATTGCACCACTTCTGTTTTTTGAGTTTTTGCATTTCCAAAACCCTAATCACGAATTCACATTGAAATCACATCGGGGTGGTGAAGAGGTCAATGTTTGGTGGCAGAGAGGAGGACGCGTTGGCGGCGCGGCTTGGCATGGTGACACCATCGCTGATGAACCCTGCAACGTCATTGGTGATATCCAGGGAGGTATCAACAGCGGTGAGGGAGGAGAGGGGACCCGCACAGCCGCAGTGGAGTCATTAGGAGACATGGGAGTTCATGCGATACGGGCAGAGCTAGAGAGGGACTTCACTGCGGCCAAGTGGAACAAGACGCTCAGGGAAGTGGTGAGTTCGAAGATGAGGGAGAGAGGGTTCAGGAGGAGCCCCGAACAGTGCAAATGCAAGTGGAAGAACCTCATTAATTGCTATATGCCTCTTTATCTGAAGCATTGGACTGAGGGAATTAAAGGGGACAAGACATCAGAAGATGACGAAATTAGCAAGCTCTTTTTTAATGTTTTGAGTATACATCTACCCAAGGTAATTGTTTGGCATGTGCATCAACTTATGGTAATCATGATGGTTGATGAAAACTCACCTAGATATTTGTCTTGTTTACACTATTATGAAGTACAACTACAGGGATTCTCACACTTGTTAAATACCTCACTTAGTATGAAGCATTTGATGTTTTAA 870 0.4632 MRPLPALVSARIFKCHIPKPLNIPLVQNLLSHSLSFPLISNFSSLLPPNTPRTLLRTRAFTSSIAPLLFFEFLHFQNPNHEFTLKSHRGGEEVNVWWQRGGRVGGAAWHGDTIADEPCNVIGDIQGGINSGEGGEGTRTAAVESLGDMGVHAIRAELERDFTAAKWNKTLREVVSSKMRERGFRRSPEQCKCKWKNLINCYMPLYLKHWTEGIKGDKTSEDDEISKLFFNVLSIHLPKVIVWHVHQLMVIMMVDENSPRYLSCLHYYEVQLQGFSHLLNTSLSMKHLMF* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1775 289 Gene3D - 150 202 - -
Vra1g1775 289 PANTHER - 152 207 - -
Vra1g1775 289 PANTHER - 152 207 - -
Vra1g1775 289 Pfam Myb/SANT-like DNA-binding domain 164 201 IPR044822 -
Vra1g1775 289 CDD GT1 152 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1775 Vra-Chr1 33761876 33763591 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g1775 152 201 Trihelix Transcription Factor Family AT2G38250 58.000 3.57e-12 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vra1g1775 Myb_DNA-bind_4 3.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1775 - - vra:111240508 573.548