Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1774 ATGTTTTCCCTCTCAAAATCCAACTTCTCTCCTGTTAGCCTCACCCTCCCTCTGTTTCGCTGCGGCATCCGCGAGCTCCGCCAACGAATCCACACCGTCCAGACCACGCAAAAGATCACTGAAGCTATGAAGCTTGTCGCCGCTGCTACGGTTCGTCGCGCTCAGGAGGTTGTCGTCAACGACCGCCTCTTCGCCTCAAACCTCGCAGAAATGTTGAACGACGTCACCCAGCGCCTAAAAAGCGATGATGTTTCCACCCCCCTCACTGATGCCAGACCCGTCAAGACCGTCGCCCTCGTCGTTTTCACCGGCGACTACGACCTCTGCGGCAGTTTCAACAAATGGGTAATAAAATGGCGATTTCAACAAAGGAGGCTCAGGTCATTGTTGATGATGTTTTCTCATTGGTTATGCGAATTCTTAAGGAAAGAGAAGAGTAAGTGGCATAAAAGAGCTCCACGGGTTTGGATGAGTCCAATGCGCCCAAAATGCCCCCTTTGTGAACGAGAAAGAAGCACCAGACCTGTAATTACACGAAACAAAAAGGAGATTAATTGGTTGTTCTTATTGCTTGGTCAAATGCTTGGTTACTGCACACTTGAGCATCTTAAATATTTCTGCAAGCATAATGAAGTCCATGGTACTGGTGCTAATGATGTTTTCTCATTGTTTGTTGTGTACACTAGGTTTGTTTCACTGGTTAGGTTTGAACCTGTGGTTCAGACTTTGCTGCCTCTGGGATAG 744 0.4785 MFSLSKSNFSPVSLTLPLFRCGIRELRQRIHTVQTTQKITEAMKLVAAATVRRAQEVVVNDRLFASNLAEMLNDVTQRLKSDDVSTPLTDARPVKTVALVVFTGDYDLCGSFNKWVIKWRFQQRRLRSLLMMFSHWLCEFLRKEKSKWHKRAPRVWMSPMRPKCPLCERERSTRPVITRNKKEINWLFLLLGQMLGYCTLEHLKYFCKHNEVHGTGANDVFSLFVVYTRFVSLVRFEPVVQTLLPLG* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1774 247 Pfam ATP synthase 23 246 IPR000131 GO:0015986|GO:0045261|GO:0046933
Vra1g1774 247 PANTHER ATP SYNTHASE GAMMA CHAIN 1, CHLOROPLASTIC 18 118 - -
Vra1g1774 247 PANTHER ATP SYNTHASE GAMMA CHAIN 1, CHLOROPLASTIC 217 246 - -
Vra1g1774 247 PANTHER ATP SYNTHASE GAMMA CHAIN 18 118 IPR000131 GO:0015986|GO:0045261|GO:0046933
Vra1g1774 247 PANTHER ATP SYNTHASE GAMMA CHAIN 217 246 IPR000131 GO:0015986|GO:0045261|GO:0046933
Vra1g1774 247 Gene3D ATP synthase, gamma subunit, helix hairpin domain 24 135 - -
Vra1g1774 247 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 22 123 IPR035968 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1774 Vra-Chr1 33746183 33746926 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g1774 205 246 Primary Pumps ATPases AT1G15700 41.176 2.80e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1774 K02115 - gmx:100797879 164.466