Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1756 ATGGCGGTAGGATTCTCCGCCGCCATAACCTTGAAGCCCTTCCTCCGCTACCACCACCCCCACTTTCCCAAACCAATTCCAGCCACACTTCCTTTCTCTCCCTTGAGAATTTCCCACCACACATCCTTCTTGAAGACCCAAAAGTTGTCACCTTTCACTGTCTCTGTCCTAACGCAGGACCCCAAAAAAAGCACCCACATGGAAATTGAGGACCAGGAGCAGCCATCACCTTCTCCTCCACAAGTCTTGTCACCAAAGTTGGCGGAGAAGTTGGCCAGAAAAGAGTCCGAGAGGTTTACCTACCTCGTCGCTGCTGTCATGTCCAGCTTCGGGGTCACATCCATGGCAGTGCTTGCTGTTTATTACAGATTCGCGTGGCAAATGGAGGGTGGAGAAGTGCCTTGGTCTGAAATGTTTGGCACATTTGCTCTGTCAGTGGGTGCTGCTGTGGGAATGGAGTTTTGGGCTAGATGGGCTCATAAAGCTCTCTGGCATGCTTCCTTGTGGCAGATGCATGAGTCCCACCATCGACCAAGAGAAGGACCCTTCGAACTGAACGATGTATTTGCCATAATCAATGCTGTCCCTGCCATCGCTCTCCTTTCCTACGGTTTCTTTCACAAGGGACTCATCCCTGGCCTTTGCTTCGGTGCGGGTCTTGGAATTACTGTCTTTGGGATGGCCTACATGTTTGTACACGATGGCTTGGTTCATAAGAGATTCCCTGTGGGCCCCATTGCCAACGTGCCCTATTTCAGAAGAGTGGCTTCTGCTCACCAACTTCACCATTCAGAAAAATTTGATGGTGTGCCGTATGGGCTGTTTATGGGACCAAAGGAAGTTGAAGAAGTGGGAGGGCTAGAAGAGCTGGAGAAAGAGATAAGTAGGAGAGCAAGATCATACAAAAACAGTTCATCATAA 921 0.4995 MAVGFSAAITLKPFLRYHHPHFPKPIPATLPFSPLRISHHTSFLKTQKLSPFTVSVLTQDPKKSTHMEIEDQEQPSPSPPQVLSPKLAEKLARKESERFTYLVAAVMSSFGVTSMAVLAVYYRFAWQMEGGEVPWSEMFGTFALSVGAAVGMEFWARWAHKALWHASLWQMHESHHRPREGPFELNDVFAIINAVPAIALLSYGFFHKGLIPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIANVPYFRRVASAHQLHHSEKFDGVPYGLFMGPKEVEEVGGLEELEKEISRRARSYKNSSS* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1756 306 MobiDBLite consensus disorder prediction 63 84 - -
Vra1g1756 306 PANTHER BETA-CAROTENE HYDROXYLASE 10 303 - -
Vra1g1756 306 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 10 303 IPR045019 GO:0016491
Vra1g1756 306 Pfam Fatty acid hydroxylase 148 275 IPR006694 GO:0005506|GO:0008610|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1756 Vra-Chr1 33439407 33442135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g1756 1 218 Chloroplast and Mitochondria Gene Families AT4G25700 57.965 8.28e-88 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1756 K15746 - gmx:100785541 523.472