Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1742 ATGGTTACATCATCACTTTGTGCTAATGATTGTGGTTTCTATGGTTCTCCTGCAACAAATAACCTTTGTTCAAAGTGCTATAAAGATTATCTCGCAAATTCAAAGGGTTGTGAAACAAGCAACAAGAGTTTTTGTTTGGAGAAGTTATCATCATCATCATGTACTTCTCAAAGGGAAGGTTCTATCATTAATGACATGATTTCTCTTTCTATCACANATTCTAAGACAAATGAAAAGAATGAGAGAAAGAGATGCAAGAGTTGTAATAAGAAGATTGGGTTATTAGGGTTTCAATGCAAATTGTGTGCATTGGAAGAGCATCAAAACCAGCAACGAGCTGGAACCAAGAAAAGCGGTAAAAGCAAAAATAGGAGGCACATGAAGGCAAGTTTCACGCTTGCGCGCCCCTCTAAGGGCGCTGAGCGCCATTTGCCTCGTAGTTTCCACGCCTAG 453 0.3951 MVTSSLCANDCGFYGSPATNNLCSKCYKDYLANSKGCETSNKSFCLEKLSSSSCTSQREGSIINDMISLSITXSKTNEKNERKRCKSCNKKIGLLGFQCKLCALEEHQNQQRAGTKKSGKSKNRRHMKASFTLARPSKGAERHLPRSFHA* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1742 150 MobiDBLite consensus disorder prediction 112 150 - -
Vra1g1742 150 MobiDBLite consensus disorder prediction 117 131 - -
Vra1g1742 150 Gene3D - 2 61 - -
Vra1g1742 150 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 4 5 113 - -
Vra1g1742 150 PANTHER AN1-TYPE ZINC FINGER PROTEIN 5 113 - -
Vra1g1742 150 Gene3D - 70 105 IPR035896 -
Vra1g1742 150 Pfam A20-like zinc finger 5 28 IPR002653 GO:0003677|GO:0008270
Vra1g1742 150 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 6 42 - -
Vra1g1742 150 SMART A20_3 4 28 IPR002653 GO:0003677|GO:0008270
Vra1g1742 150 ProSiteProfiles Zinc finger A20-type profile. 1 35 IPR002653 GO:0003677|GO:0008270
Vra1g1742 150 SUPERFAMILY AN1-like Zinc finger 73 100 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1742 Vra-Chr1 33180563 33190385 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g1742 6 138 C2H2 Transcription Factor Family AT3G52800 28.571 1.77e-08 49.3