Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1738 ATGACGCAGAAGAGAAAAAGAGAAAGGAAGAATGAGCTAAAGAATGAGGGTGGCTTTGCCGGAAAACAAGAACAGAGGAAGAGAACCACGAAAAACAGAGGAAGAGAATGGCCTCTAAATATTACAAGTAGTGTGATTTTGGTCAGATGCAAATATTACCCAAATTTGCGACTGCGATTGGAATTTTCTGGGCGATTGAAATTAGGGTTCATCAAGCATTTTGGCGATGGAGATGGTGCTTTGGTTTGGTTTCAGATACTGATTGACCCTTCTGATTGGGAAGATCATTCCAAAGGAAAGGAAGGTTGCGTAAGATACAGGATTCATAACCTCCCCAAGGAATCGAATCCAGGGGTGTATGAGCTTGGAATTGATGTATTCGATGGTGGTTTAGGGCGTGAAATTTCCAAGCTTACCCCTCATTCTCATCGCATAGTGATGGTTTACCTTGGACAAGCTGACAATGTGAGAACAAGACTCCAGCATTATGGCAGAACAGGTGATCATATGCAGAGTGGTTGTTGGAATGGTTCTTCTTCCCAAAAGGGGCGCCCCTTGTTTGAGGAAGTGTTTTCACAAGGATTCTCAATCGTTTATAGATGGGCTCCTAAACAACGAGAGAAGACCAAACATGGAGGAAAGGAGAAGGAAGAAAGCTTGATGGAAGAGCTGCAGAGCTTAGAGAAGCTGCAGAGGCCAAAATCACTTTACTTACCCACTCCAAATTACCCCAAATTCAATTTTTAA 747 0.4284 MTQKRKRERKNELKNEGGFAGKQEQRKRTTKNRGREWPLNITSSVILVRCKYYPNLRLRLEFSGRLKLGFIKHFGDGDGALVWFQILIDPSDWEDHSKGKEGCVRYRIHNLPKESNPGVYELGIDVFDGGLGREISKLTPHSHRIVMVYLGQADNVRTRLQHYGRTGDHMQSGCWNGSSSQKGRPLFEEVFSQGFSIVYRWAPKQREKTKHGGKEKEESLMEELQSLEKLQRPKSLYLPTPNYPKFNF* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1738 248 MobiDBLite consensus disorder prediction 206 248 - -
Vra1g1738 248 MobiDBLite consensus disorder prediction 206 229 - -
Vra1g1738 248 Pfam GIY-YIG domain-containing protein 84 221 - -
Vra1g1738 248 MobiDBLite consensus disorder prediction 1 34 - -
Vra1g1738 248 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 85 207 IPR038909 GO:0003677|GO:0006355
Vra1g1738 248 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 85 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1738 Vra-Chr1 33053770 33071710 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g1738 78 203 HRT Transcription Factor Family AT5G56780 45.522 7.37e-28 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1738 - - vra:106762033 489.574