Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1724 ATGACAACAGAAGTGGGAGATGAAGAGTTTTACATTACATCATGCACGTACTTGCCCCCTCGGGTGAATTCAGATACACCATGGTGCACCATAAATGGCATGCTTCCAACTAATGCTTTACCAATGTTGGAGATGCAGATATGTATTATCTTTCTTGCAACCTTTCTCTTGCACGCCATTCTGGGTCGTCTAAGATTCCCCAGATTCGCTTCCATGTGCATTGTTGGCCTGATATTTGCAACCAGCTTCACTGAAGAATGGGCTCGGAAGAGTAGAGAGTTGTTCTTTTTTGACTCTCAGGCAAGTCTGGGGATGCTTTCAGTTTTTGGCTACATGCTTTTCCTGTTCTACACAGGGGTGAAAACAGACGTGAGTGTGATTCCCAGGACCAAAAGTAGTGCAGCCACCATAGGGTGTGCTACCATACTGGCTCCATTTATATGCAGCATGACTGTTGTGAATTTATACTCCACAAAATACCTGGACAGTGATCAGATAGCAAAAGTTAGACTTATCATTGGTGTGTTCTCGGTGACTCCTTTCCCTAACATTTGCACAGTTTTAAGTGATCTCAAGATTCTGAATTCGGAGCTAGGTAGATTAAGCCAGTCCGCAGCTTTGGTTACTGAGCTCTTCAATGTGGTCTTCACATCAATCCTTAGTATCTCCAAAATTTTGTCTAGTGATCCAGAAAAAGCCTGGTTTCGCCTCATAGTTTTGATTTTGTTTCTGCTAATGCTTATCTTCGTCTATCGCCCAGCCATGTTTTGGATCATAAAACAGACCCCAGAGGGTTCTCCTGTTAGTGATCACTATGTGTATTTCATACTCATAATGGTTTTTGTGGCTTCCTATATCACACATCGCATTGGATTTTTGGCTCTCTTTGGCCCTTTTGCATTGGGCATGGCCACCCCAGAAGGGCCTCCATTAGGCACTGCAGTTATAAAAAAGATTGACACTTTTGTTAACTGGATGTTCATGCCTCTCTTTGTGACCACATGTGTGATGAGGGTGAACCTCAGAGACTTCATGAAATGGAGAGACGAAGTGACTGGAGGAATTGACCAGTTCATGTTGCAAGCCCTGATTATCATTGCAGTAACTAGCACTGTCAAATTTGTTGTATGCATGCTGCTTCCTTTGTACCACAACGTGCCCTTGAGTGACTCAGTTTCTCTCTCTTTGGTCATGAATTGCAAGGGCGTAGTTGAATTGGCTGGATTCTCTATAATCAGAGATCTCATGGGCATGCCAGACAACGTGTTGGCATTGGTGATAATGAGCATAATTCTGACTGCTACAGTGGGGCCATTTCTTCTAGCATACCTCTACGACCCCATGAAGAAATATGCAGGAAACTACACCAAGCGAAACATCTTTGACCTCAAAAACAACTCCGAGCTTCGAGTTCTCACATGCATCCACAGACCCGACAACATTCCTCCGACCATCAACCTTCTCGAAGCCACCTTCCCCACCAAAGACAACCCTCTCTGTATCTACGCCCTCCAGCTCATAGAACTCATCGGAAGAGCTGCTCCTGTCTTCATCTCTCACCAACTCCAGTCCAAGAAAACACACGACTCAAACGCTTCCATGGCAGACAAACTCATCGATGCGTTCCAAAACTTCGAGCACGAGTTCAAGGATGCACTGGTGGTGAACACCTTCACATCAATCTCACCAACTGAGTTGATGTACGATGACATCTGCACTTTGGCGTTGAACAAGTACACCTCCCTCATTGTTCTTCCCTTTCATAAAAAGTGGTCTTCTGATGGCAACAGCATTGAGATAGAAGATGAGTCTCTGAGAGAGTTGAACTTCCGTGTCATGCGGAGAGCTCCATGTTCTGTTGGGATATTGATTGAGAGAATGCAAATGACGCATATTTTCTCCCCAGAGACGCCTTACACTGTTTGCATGCTTTTCATTGGAGGGAAAGATGATAGAGAAGCACTTTACTTTGCTAAGAGGATGACCAAGAATCCGCATGTCAGACTCACTGTGGTCAGGTTTTTGGCTAGGAATAAATATTCGGAGGTAACAGATTTGCAGGAACTGCTTGACACTGAGATTCTGAATGATATCAGGATTAACGGGAAGGTGGGTGAGACTAATGTGAATTACATAGAGAAGATTGTGAAGGATGGACCTGAGACGGCTTTGGTGATTCGGAAGTTGGTGAAGGAGTATGATTTGATCATTGTTGGAAGACAAGCTGGGATTGAAACTCCTCAAACTTCTGGGTTGTTGCAATGGAGTGAGTATCCAGAACTTGGGGTGCTTGGAGATTTGTTGGCTTCAACTGATGCTGCTGGCAAGGCTACTGTGTTTGTGATGCAGCAACAAAGAAGAGACACGGATGCTTAA 2376 0.4444 MTTEVGDEEFYITSCTYLPPRVNSDTPWCTINGMLPTNALPMLEMQICIIFLATFLLHAILGRLRFPRFASMCIVGLIFATSFTEEWARKSRELFFFDSQASLGMLSVFGYMLFLFYTGVKTDVSVIPRTKSSAATIGCATILAPFICSMTVVNLYSTKYLDSDQIAKVRLIIGVFSVTPFPNICTVLSDLKILNSELGRLSQSAALVTELFNVVFTSILSISKILSSDPEKAWFRLIVLILFLLMLIFVYRPAMFWIIKQTPEGSPVSDHYVYFILIMVFVASYITHRIGFLALFGPFALGMATPEGPPLGTAVIKKIDTFVNWMFMPLFVTTCVMRVNLRDFMKWRDEVTGGIDQFMLQALIIIAVTSTVKFVVCMLLPLYHNVPLSDSVSLSLVMNCKGVVELAGFSIIRDLMGMPDNVLALVIMSIILTATVGPFLLAYLYDPMKKYAGNYTKRNIFDLKNNSELRVLTCIHRPDNIPPTINLLEATFPTKDNPLCIYALQLIELIGRAAPVFISHQLQSKKTHDSNASMADKLIDAFQNFEHEFKDALVVNTFTSISPTELMYDDICTLALNKYTSLIVLPFHKKWSSDGNSIEIEDESLRELNFRVMRRAPCSVGILIERMQMTHIFSPETPYTVCMLFIGGKDDREALYFAKRMTKNPHVRLTVVRFLARNKYSEVTDLQELLDTEILNDIRINGKVGETNVNYIEKIVKDGPETALVIRKLVKEYDLIIVGRQAGIETPQTSGLLQWSEYPELGVLGDLLASTDAAGKATVFVMQQQRRDTDA* 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1724 791 PANTHER CATION/H + ANTIPORTER 13 787 - -
Vra1g1724 791 PANTHER CATION/H(+) ANTIPORTER 4 13 787 - -
Vra1g1724 791 Pfam Sodium/hydrogen exchanger family 48 441 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Vra1g1724 791 Gene3D - 42 453 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1724 Vra-Chr1 32394931 32397718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g1724 15 786 Antiporter Super Family AT5G22900 35.049 1.11e-163 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1724 - - vun:114180838 1423.68