Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1705 ATGGATGGTGAAAGCGTTGACGATTTTAATACNGGAGATGAGGGTTTTTCAGACATCGTTCCTAGTGTGAACATGTGTTTTGACAGTATGGAGGATGCCAAGAAATTTTATTGTGATTATGGAAAAAGATGTGGTTTTGGTGTTCGAACAAGAACTTCAAAGAAGAACAACAAAAACGAAGTTTATTACTTGAGATTAGTTTGTTCAAGGGAAGGTAGATATGTTTCTAACATTCGTCCTGAAGTCAAAACTCTACCTAGTCAAACAAATCAATGTCCTGCAGGAATCACATTTGCTAGAAAAGATGAGAAATGGGTTGTTAGGACTATTGTTGTANAGNACAGTCATGAGCTTTGTCCACAAACCTCCAATCTAATTCGTGGCAATAGAAAATTGAACATGCACACCAAACACACGTTGGAAGTTAACGATGACGCGGGTGTACGTATAAACAAGAGTTTTCTTAGCATGGTGAGTGACGCTGGTGGATATGAAAATATGGAATTTATGGAGAGAGATGCTAGAAACTTCATCAGTCAACATAGAAGGTCAGTTTGTAAGGACGGAGATGGTCAGACGCTACTACGTCACTTTTCAAAAATGAGAGACCTGAATAACGATTTCTTCTACGAACTAGAAATGGATGAAGGAAATAGAATTACTAGTGTATTTTGGGCGGATGCTAAAAGCCGAGCTGCTTGTGAAGAATTTGGTGATGTGGTTTCTTTCAATACGACTTATCTAAACAAACAAATATGA 759 0.3768 MDGESVDDFNTGDEGFSDIVPSVNMCFDSMEDAKKFYCDYGKRCGFGVRTRTSKKNNKNEVYYLRLVCSREGRYVSNIRPEVKTLPSQTNQCPAGITFARKDEKWVVRTIVVXXSHELCPQTSNLIRGNRKLNMHTKHTLEVNDDAGVRINKSFLSMVSDAGGYENMEFMERDARNFISQHRRSVCKDGDGQTLLRHFSKMRDLNNDFFYELEMDEGNRITSVFWADAKSRAACEEFGDVVSFNTTYLNKQI* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1705 252 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 19 250 IPR031052 GO:0006355
Vra1g1705 252 Pfam FAR1 DNA-binding domain 35 119 IPR004330 -
Vra1g1705 252 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 19 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1705 Vra-Chr1 31665290 31666048 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vra1g1705 FAR1 2.2e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1705 - - vra:106759276 504.212