Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1652 ATGTGTTCTGAAAATGGAGATTTCTCTGTGAGTGTGACGAACGAAGAGGTGGTGGCAGCAGTGTTACCAGTGCAAGAACATTGGCTTCCACTGTCGAACCTTGACCTGCTTCTACCTCCATTGGATGTAGGAGTATTCTTTTGCTACAAGAACCCTATTATCACATCCACAACCATGGAAGACTGTGCCACCAACAAAATGACCTTTGGAACCATGGTGGGGTCTTTGAAGAAGGCCTTGGCACAAACCCTAATCTCTTATTATGTGTTTGCAGGTGAAGTCGTGCTCAACAGCATGGGTGAACCTGAAGTTCTCTGTAACAATCGTGGTGTTGATTTTGTTGAAGCTGAGGCAGATGTTGAACTTAAGAACCTCAACTTTTACAATCCAGACCAATCTATTGAAGGCAAGTTTGTTCCAAAGAAGAAGAATGGTGTGCTTGTTGTACAGACAACCGCACTTAAGTGTGGAGGAATAATAGTGGCATGTACATTTGATCATCGCATAGCAGATGCCTATTCAACAAACATGTTTCTTGTTTCATGGGCTACCATGGCCCATCCCACAACCACCATTCTCGCCACCACTTCCTGCCATCCATGTTTTCGTCGCTCTCTTCTCAGCCCTCGTCGTCCAGGTTCCATCCACCCTTCTTTGCACCAAATGTACACTTCTATCTCCCATCTCCCTCCCCCTCCCACCACCGCCACCACTGCTCTTCTTAGTCGGATATATTTCGTCACGGCAGAGCAACTTCACTACATGCAGTCCCTCGCCGCCACCCGCACGAAGTTGGAGTGTTTCTCGGCTTTATTGTGGAAGATGGTTGCATGTGCAGCTTCAAGAGACACAAATAGTAAAAGGGTTACTGTCAAAATGGGCATTGTGATTGATGGAAGGAAGAGACTACGTAATGGTGACAAAGAGAGTGAAGCAATGATGGAGTGTTACTTTGGGAACGTGCTTTCCATACCCTTTGGAGAGAAACTGGTTGAGGAGTTGGTGAAGGAGCCATTAGAGTATGTGGTTGAGGCTGTTCACAAGTTTTTGTCGGTGGCCGCCACAGAGGAGCACTTCTTAGGACTAATTGATTGGATGGAGGCTCAGAGGCCGATTCCTGGAGTGTCAAGAATTTATTGTAACCGTGCTGACGAGGGACCAGCCTTTGTGGTGTCGTCCGGTCAGAGGTTTCCGGAGGGGAAGGTGGATTTTGGGTGGGGGAAAGCGATGTTTGCATCGTACCATTTTCCTTGGGGTGGTGAAGCTGGTTATGTTATGCCAATGCCAAGTCCTTTGGGGAATGGTGATTGGGTTGTGTACATGCACCTTGCAAAGAAGCACTTGGACATCATAGAGACTGAAGCTGCTCATGTGATTAAGCCTTTGACTTGGGATTACCTTAACAAATAA 1410 0.4695 MCSENGDFSVSVTNEEVVAAVLPVQEHWLPLSNLDLLLPPLDVGVFFCYKNPIITSTTMEDCATNKMTFGTMVGSLKKALAQTLISYYVFAGEVVLNSMGEPEVLCNNRGVDFVEAEADVELKNLNFYNPDQSIEGKFVPKKKNGVLVVQTTALKCGGIIVACTFDHRIADAYSTNMFLVSWATMAHPTTTILATTSCHPCFRRSLLSPRRPGSIHPSLHQMYTSISHLPPPPTTATTALLSRIYFVTAEQLHYMQSLAATRTKLECFSALLWKMVACAASRDTNSKRVTVKMGIVIDGRKRLRNGDKESEAMMECYFGNVLSIPFGEKLVEELVKEPLEYVVEAVHKFLSVAATEEHFLGLIDWMEAQRPIPGVSRIYCNRADEGPAFVVSSGQRFPEGKVDFGWGKAMFASYHFPWGGEAGYVMPMPSPLGNGDWVVYMHLAKKHLDIIETEAAHVIKPLTWDYLNK* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1652 469 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 8 462 - -
Vra1g1652 469 Pfam Transferase family 9 456 - -
Vra1g1652 469 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 462 - -
Vra1g1652 469 Gene3D - 224 453 IPR023213 -
Vra1g1652 469 Gene3D - 7 223 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1652 Vra-Chr1 29825316 29829616 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g1652 23 452 Monolignol Biosynthesis Gene Families AT5G48930 24.554 2.44e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1652 - - gmx:100785067 726.857