Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1647 ATGTGTTCTGAAAATGGAGATTTCTCTGTGAGTGTGACGAACGAAGAGGTGGTGGCAGCAGTGTTACCAGTGCAAGAACATTGGCTTCCACTGTCGAACCTTGACCTGCTTCTACCTCCATTGGATGTAGGAGTATTCTTTTGCTACAAGAACCCTATTATCACATCCACAACCATGGAAGACTGTGCCACCAACAAAATGACCTTTGGAACCATGGTGGGGTCTTTGAAGAAGGCCTTGGCACAAACCCTAATCTCTTATTATGTGTTTGCAGGTGAAGTCGTGCTCAACAGCATGGGTGAACCTGAAGTTCTCTGTAACAATCGTGGTGTTGATTTTGTTGAAGCTGAGGCAGATGTTGAACTTAAGAACCTCAACTTTTACAATCCAGACCAATCTATTGAAGGCAAGTTTGTTCCAAAGAAGAAGAATGGTGTGCTTGTTGTACAGGCAACATCACTAAAGTGCGGTGGAATAGTTGTAGCATGTTCATTTGATCATCGCATTGCAGATGGGTATTCAGCAAACATGTTTCTGACTTCATGGGCCGATACGGCCCATCCCACCAAGCCCACAACTGTGAGCCCATGTTTCCGTCGGTCCCTCCTCACTCCTCGTCGTCCATGTTCTGTTCCTCCTTCCCTTCACCAAATGTACACCCCTAATTCGAAGTTTACCCCACCTCAAACCGCAACCGCCCCTCTCTTGAGTCGCATATACTACGTAACTTCTGAGAAACTTCACAGCATGCAAGCCCTTGCGAGTAGCAATGGTGGAAAACGTACGAAGCTTGAGTGCTTTTGTGCGTTGTTGTGGAAAATGGTTGCACGTGCGGCTTCAAGAGAGGGAAGGGGCAAAAGGATGGCGAAAGTGGGAGTCGTGGTTGATGGAAGGAGAAGACTGTGGAAAAGTGAGAAAGTGAAGGAAGCGTTGATAGGGAATTACTTCGGGAACGTGCTTTCGATACCCTTTGGAGAGAAGGTGGTGGAGGAGTTGATGGAGAAGCCGTTAGGGTTTGTGGCTGACGCGGTTCACGAGTTCTTGGCGGAGGCGACGACGGAGGAGCATTTCTTGGGGCTGGTTGATTGGGTGGAGGGTCATAGACCAGAGGGAGGGTTGGCAAGGATTTACGGAGATGGAAGTGAAGGAGGGAGCTTTGTGGTGTCTTGTGGGCAAAGGTTTTTGGAGGGGAAGATGGATTTTGGGTGGGGGAAGCTTGTGTTTGGGTCATTCCATTTTCCCTGGGGTGGTGCAGCTGGTTATGTGATGCCAATGAAGAGCCCTCTAGGGAATGGTGATTGGGTTGTGTACATGCATCTTACGAAGGAGCAATTGGAAGTCATAGAATGTGAGGCTGGTGATGTTTTTAGACCCATGACATGGGATTACCTTTGTTAG 1398 0.4821 MCSENGDFSVSVTNEEVVAAVLPVQEHWLPLSNLDLLLPPLDVGVFFCYKNPIITSTTMEDCATNKMTFGTMVGSLKKALAQTLISYYVFAGEVVLNSMGEPEVLCNNRGVDFVEAEADVELKNLNFYNPDQSIEGKFVPKKKNGVLVVQATSLKCGGIVVACSFDHRIADGYSANMFLTSWADTAHPTKPTTVSPCFRRSLLTPRRPCSVPPSLHQMYTPNSKFTPPQTATAPLLSRIYYVTSEKLHSMQALASSNGGKRTKLECFCALLWKMVARAASREGRGKRMAKVGVVVDGRRRLWKSEKVKEALIGNYFGNVLSIPFGEKVVEELMEKPLGFVADAVHEFLAEATTEEHFLGLVDWVEGHRPEGGLARIYGDGSEGGSFVVSCGQRFLEGKMDFGWGKLVFGSFHFPWGGAAGYVMPMKSPLGNGDWVVYMHLTKEQLEVIECEAGDVFRPMTWDYLC* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1647 465 Pfam Transferase family 9 451 - -
Vra1g1647 465 Gene3D - 219 450 IPR023213 -
Vra1g1647 465 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 459 - -
Vra1g1647 465 Gene3D - 7 218 IPR023213 -
Vra1g1647 465 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 8 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1647 Vra-Chr1 29738362 29740992 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g1647 19 449 Monolignol Biosynthesis Gene Families AT5G48930 25.386 6.88e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1647 - - gmx:100777149 701.819