Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1605 ATGGCAGAGGAGTTGATTCTGTTGGATGACTGGCTGAGTATGTACGGCATGAGAGCAAGGATAGCACTTGCAGAGAAGGAGATAAAGTATGAATACAGAGAAGAGGATCTGGGAAACAAGACCCAACTGCTTCTGCAAATGAATCCAATTCACAAGAAGATTCCAGTTCTCATCCACAATGGTAAACCCATATGTGAGTCCATCATTATTGTTGAGTATATTGATGAGGTTTGGAAGGAGAAAGGCTCTTTCTTACCCTCAGATCCTTATGAGAGAGCTCAGGCCAGGTTCTGGGCAGATTTTGTGAACAAAAAGATAGGTGATGTTGGGTGGAAGATATGGGCAGGAAAGAGAGAAGGGATTGAAGAGGCAAAGAAAGAGTTTGTGGAGGGCTTAAAGGAATTGGAGAAGGAGCTTGGAGAGAAGGCTTACTTTGGGGGAGACACATTTGGATTTGTTGACATTGCTCTCATCCCTTTCTCCACCTGGTTTTACACTTATGAGGCATTGGGGAATTTCAAAGTGAAGGAAGAGTCTCCTAAGATCATTGCTTGGGTTGAGAGATGCAATCAGAGGGAAAGTGTTTCCAAATCTCTTGCTCCTGAGAAGGACGTCTATGACTTTGTTCTAAGCTACAGACAGAGCCATCACTTGGACTAA 660 0.4364 MAEELILLDDWLSMYGMRARIALAEKEIKYEYREEDLGNKTQLLLQMNPIHKKIPVLIHNGKPICESIIIVEYIDEVWKEKGSFLPSDPYERAQARFWADFVNKKIGDVGWKIWAGKREGIEEAKKEFVEGLKELEKELGEKAYFGGDTFGFVDIALIPFSTWFYTYEALGNFKVKEESPKIIAWVERCNQRESVSKSLAPEKDVYDFVLSYRQSHHLD* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1605 219 SUPERFAMILY Thioredoxin-like 6 106 IPR036249 -
Vra1g1605 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 212 IPR045073 -
Vra1g1605 219 Gene3D Glutaredoxin 1 87 - -
Vra1g1605 219 SFLD Main.3: Omega- and Tau-like 2 216 IPR045073 -
Vra1g1605 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 208 IPR010987 -
Vra1g1605 219 Coils Coil 118 138 - -
Vra1g1605 219 SFLD Main (cytGST) 2 216 - -
Vra1g1605 219 Gene3D - 88 217 - -
Vra1g1605 219 CDD GST_N_Tau 5 78 - -
Vra1g1605 219 Pfam Glutathione S-transferase, C-terminal domain 120 188 - -
Vra1g1605 219 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
Vra1g1605 219 SUPERFAMILY GST C-terminal domain-like 76 215 IPR036282 -
Vra1g1605 219 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 4 212 - -
Vra1g1605 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Vra1g1605 219 CDD GST_C_Tau 89 212 IPR045074 GO:0004364|GO:0006749
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1605 Vra-Chr1 28121249 28122388 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g1605 1 216 Glutathione S-transferase Gene Family AT1G78370 60.648 1.01e-98 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1605 K00799 - mnt:21386514 295.434