Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1592 ATGATACAGGTGGGGTGCATCGAGCCCGTCATGGTCCTCCGTGTCGACAAGGAAAAGGGTTACATCGATCTCAAAGAGCGTAGGGTCTACGAAGAGGATATTCAGGCCTACGAGGAGAGATACAACAAGAGCAAGCTCGTCCACTCCATCATGCGCCAAATTGCTGAAATCCTCAACATCGATTTGGAGAACCCAGCATGTTATTCTTGGAATCTCCTGTTGGAGTTGGCTTTTCATACTTATACAAGCGGTGACTATGACCAATTGGGAGATGATTTAACAGGTCATAGCTACGACACCACGGGTGGATATCGTGAAAGGGTTGTGGCTTTAGATCAAATGGACCAATCCAAGAAGTTGCATGAGGCAACTAGTTGTCTGGCATGA 387 0.4703 MIQVGCIEPVMVLRVDKEKGYIDLKERRVYEEDIQAYEERYNKSKLVHSIMRQIAEILNIDLENPACYSWNLLLELAFHTYTSGDYDQLGDDLTGHSYDTTGGYRERVVALDQMDQSKKLHEATSCLA* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1592 128 Gene3D - 1 29 IPR012340 -
Vra1g1592 128 PANTHER BNAC04G04870D PROTEIN 1 65 - -
Vra1g1592 128 Gene3D Translation initiation factor 2; subunit 1; domain 2 31 101 IPR024054 -
Vra1g1592 128 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1 1 65 IPR011488 GO:0003723|GO:0003743
Vra1g1592 128 SUPERFAMILY eIF2alpha middle domain-like 29 63 IPR024054 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1592 Vra-Chr1 27675484 27678625 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g1592 1 64 Eukaryotic Initiation Factors Gene Family AT2G40290 79.688 1.30e-28 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1592 K03237 - vra:106765684 263.077