Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1589 ATGAACAAGTATTGCAGGTATCATCTCAATAGAAATCATACTATCGATGAGTGCGCCACTCTTCGAGAAAAGGTTGTCTATGCTAAAACAGACATAACTGCTGGGTCAAAAGGCATTACTGCATTCATTATTGAGAAGGGAATGTCTGGATTCAGTACTGCCCAGAAATTGGACAAACTTGGGATGCGAGGAAGTGATACATGTGAGCTTGTCTTTGAGAATTGCTTTGTTCCAGAAGAAAATGTTCTTGGAAAAGAGGGAAAAGTGTATACTATTAAAACTCCTGACGGTGGCTGCTTGGCTGTTTTCCTGAGAACGGGTTTTGAAACAAGTCAAGGAAAGTTGATGCGAACAATCTTATTCTCTACAGAAAGGGTCACTGCCAATAGCTGGGAAAGTGGATTGTTCATTTTATTCTTGGTTGTATTTGCTCTTATTGCTGTTGGTTATGTGCTTGTTAAGGGGCTGGAAGATCCCACAAGGAGCAAGTATAAACTAATACTAAGTTGTTCACTTATTGTTACTTTTGTGATACCTCCTGAGTTACCAATGGAATTATCGATAGCTGTTGATACTTCTCTTATTGCCCTGGCACGGCGTGGGATTTTTTGCACAGAGCCTTTTCGGATACCATTTGCTGGAAAGGTTGATATATGTTGTTTTGACAAGACATGCAGGGACAATTACATCTGA 693 0.4012 MNKYCRYHLNRNHTIDECATLREKVVYAKTDITAGSKGITAFIIEKGMSGFSTAQKLDKLGMRGSDTCELVFENCFVPEENVLGKEGKVYTIKTPDGGCLAVFLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFALIAVGYVLVKGLEDPTRSKYKLILSCSLIVTFVIPPELPMELSIAVDTSLIALARRGIFCTEPFRIPFAGKVDICCFDKTCRDNYI* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1589 230 Gene3D - 14 90 IPR046373 GO:0016627
Vra1g1589 230 PANTHER CATION-TRANSPORTING ATPASE 88 225 - -
Vra1g1589 230 PANTHER CATION-TRANSPORTING ATPASE-RELATED 88 225 - -
Vra1g1589 230 SUPERFAMILY Acyl-CoA dehydrogenase NM domain-like 25 92 IPR009100 GO:0016627
Vra1g1589 230 SUPERFAMILY Calcium ATPase, transmembrane domain M 129 214 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1589 Vra-Chr1 27337746 27344143 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g1589 23 224 Primary Pumps ATPases AT5G23630 66.505 1.02e-79 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1589 K14950 - vra:111241575 457.218