Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1587 ATGGAGATGAAAAGCAGTGAAGAGATAGAGATTGGAAGAGACATAACTCCAACTCTCACTCCTCTCTCTTTCTCTCTCCACAATTCCAATCTCAACACTCACTGCTCCGCCTGTTTCTCTCCTCTTTCCAGCCCTTTTCCGTCCATTCCCACTCCCCTCTTCTACTGTTCCCCTCCCTGCTCCGCCGCCCTTTCCCCTCTCCACAACTCCTCCGCCGAGATCCACCTCCCTCCCTCCGCCCATTCCTCCGACCTCCGTGCTGCCCTACGCCTCCTCTGCTCCCACCGCCCCTCCTCCTCCCTCCGCCTCGCCGGCCTCCTCTCCAACCACCCCATCCTCACCTCTCCTCAAACCCCTTCCCTCTCCCATCACGACGACCATGTATCGGAGCGAATCAAGCTCGGCGCCGCCGCCATGGCCCAATCCATCTCCGTGCAGCGTGCCGTTCCGAACGACGACGCCGTTTTGGAGGAGGCTACGATGGCGTTATGCGCGGTGCTGACGAACGCCGTAGAGGTGCACGATAACGAAGGGCGCGCCCTCGGAATCGCTGTTTTTGATCCCACCTTCTCTTGGATCAACCACAGCTGTTCTCCCAACGCATGCTACCGTTTCGTCCTCTCTTCTCCTCCTTCCTCTTCTCATTCCGATGAACCTGAACTTCTTCGCATTGCTCCGCATCCACAAATGGGTAGTGGTGGGAATTGTGTTAGCAGTAATGAATTTGACAAAGAGGTGCTGGGTTATGGCCCTAGATTGGTTGTGAGGAGTATCAAGAAAATTAAAAAGGGAGAAGAGGTCACTGTAGCCTATACGGATATCTTGCAGCCCAAGGAAACGAGACAGTGGGAGCTATGGTCAAAGTATAGGTTTGTTTGTTGTTGCAAACGATGTAGAGCTCTTCCTTTTTCATACGTGGATCATGCATTGCAAGAAATTTCAGCTTTCTGTTATGATTCAACGGATTCATATTCCAAGTTCCTCAAAGACATGGCTGATAGAAAATTGAGTGAGTGCATTGATGATGTCATATCAGAGTATCTTTCGGTTGGTGATCCTGAGTCTTGTTGTGACAAGCTTCAGAAGATACTCATGCAAGGTCTAAATGAGCAGTTAGAATACGTTAAAGGAAAATCAGATTCTAAGTTCATGCTGCATCCCCTCAACCACCATTCTTTAAAAGCGTACACGACACTGGCTTCAGCGTATAAAGTTTGTGCCAGTGATTTATTGTCTGTAGATTCTGCAATAGATACAAACCAGTTAAAGGCTTTTGACATGAGCAGGACCAGTGCTGCATATTCGCTGTTACTTGCTGGTGCAACTCATCATCTCTTCAATTATGAATCCTCACTTATTGTTTCTGTTGCAAATTTTTGGATAGGAGCTGGTGAATCCTTGTTATTCCTAAGCAGAAGTTCTGGATGGGGTACGTGTGATAATTTGGGTCTGATTGTTCCCAACCATACTTCAGCCATTAAATTTAAATGGTCGAAGTGTTCATTAGTTGATAGGATTAGAACCTGTATAGCAAATGGTCAAATTAACAGTGCCGATTTTGAGAATGTATCAAATGAATTTATTTATTATGTCTCAGATATTACACAGAAAGTATGGGGTTTTCTTATCTCTGATTGCTCTTTTTTGAGATCCTGTAAAGATCCTATTAATTTCAGTTGGCTAACGTCTACCAAAAGCTCCAATAGAATGGATTTTGAGGTTTGCGTTGACAAAAGTTACAAAACTGAGCTCAGTTACACCCATGAACCTGAAAACAGCATCTATATCTGTGAAGAACCAACCTCCACTGATGATGTATTAGCATGCCTTTTACAGCTTGGTTTACACTGCTTAGCTTATGGGGGATTGTTGGGCAGTATTTGTTATGGTTCCCAGTCTCATGTGGTTTGTCATGTTCAAAACGTTCTAGACCGTGAAAAGAATACTGTTTTATACTCGTGA 1962 0.4572 MEMKSSEEIEIGRDITPTLTPLSFSLHNSNLNTHCSACFSPLSSPFPSIPTPLFYCSPPCSAALSPLHNSSAEIHLPPSAHSSDLRAALRLLCSHRPSSSLRLAGLLSNHPILTSPQTPSLSHHDDHVSERIKLGAAAMAQSISVQRAVPNDDAVLEEATMALCAVLTNAVEVHDNEGRALGIAVFDPTFSWINHSCSPNACYRFVLSSPPSSSHSDEPELLRIAPHPQMGSGGNCVSSNEFDKEVLGYGPRLVVRSIKKIKKGEEVTVAYTDILQPKETRQWELWSKYRFVCCCKRCRALPFSYVDHALQEISAFCYDSTDSYSKFLKDMADRKLSECIDDVISEYLSVGDPESCCDKLQKILMQGLNEQLEYVKGKSDSKFMLHPLNHHSLKAYTTLASAYKVCASDLLSVDSAIDTNQLKAFDMSRTSAAYSLLLAGATHHLFNYESSLIVSVANFWIGAGESLLFLSRSSGWGTCDNLGLIVPNHTSAIKFKWSKCSLVDRIRTCIANGQINSADFENVSNEFIYYVSDITQKVWGFLISDCSFLRSCKDPINFSWLTSTKSSNRMDFEVCVDKSYKTELSYTHEPENSIYICEEPTSTDDVLACLLQLGLHCLAYGGLLGSICYGSQSHVVCHVQNVLDREKNTVLYS* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1587 653 PANTHER PROTEIN SET DOMAIN GROUP 41 1 647 - -
Vra1g1587 653 SUPERFAMILY SET domain 150 296 IPR046341 -
Vra1g1587 653 CDD SET_SMYD 147 298 - -
Vra1g1587 653 Pfam SET domain 187 271 IPR001214 GO:0005515
Vra1g1587 653 Gene3D SET domain 135 301 IPR046341 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vra1g1587 SET 1.6e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1587 - - gmx:100775193 920.228